FFCP PHASE1:Hg19::chr11:57154881..57154893,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-55bp_to_CU675194_5end | |association_with_transcript=-55bp_to_CU675194_5end | ||
|cluster_id=chr11:57154881..57154893,+ | |||
|coexpression_cluster_id=C289 | |||
|description=CAGE_peak_1_at_CU675194_5end | |description=CAGE_peak_1_at_CU675194_5end | ||
|id=chr11:57154881..57154893,+ | |id=chr11:57154881..57154893,+ | ||
|ontology_enrichment_celltype=CL:0002541!2.08e-36!3;CL:0002566!9.73e-13!1;CL:0002537!1.95e-10!5;CL:0000764!4.17e-07!2;CL:0000765!4.17e-07!2;CL:0000050!4.17e-07!2;CL:0000038!4.17e-07!2;CL:0000558!4.17e-07!2;CL:0000547!4.17e-07!2;CL:0000549!4.17e-07!2;CL:0000550!4.17e-07!2;CL:0000552!4.17e-07!2 | |ontology_enrichment_celltype=CL:0002541!2.08e-36!3;CL:0002566!9.73e-13!1;CL:0002537!1.95e-10!5;CL:0000764!4.17e-07!2;CL:0000765!4.17e-07!2;CL:0000050!4.17e-07!2;CL:0000038!4.17e-07!2;CL:0000558!4.17e-07!2;CL:0000547!4.17e-07!2;CL:0000549!4.17e-07!2;CL:0000550!4.17e-07!2;CL:0000552!4.17e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.28e-53;3!CL:0000349;1.31e-19;19!CL:0002537;2.97e-09;5!CL:0000134;4.43e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.28e-53,3;CL:0000349,1.31e-19,19;CL:0002537,2.97e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8552!2.62e-13!1;DOID:225!3.76e-13!1;DOID:74!3.28e-07!2 | |ontology_enrichment_disease=DOID:8552!2.62e-13!1;DOID:225!3.76e-13!1;DOID:74!3.28e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:8552;2.70e-40;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8552,3.30e-40,1 | |||
|ontology_enrichment_uberon=UBERON:0000476!2.08e-36!3;UBERON:0000920!2.08e-36!3;UBERON:0005631!3.35e-30!14;UBERON:0000158!3.35e-30!14;UBERON:0003124!1.58e-27!7;UBERON:0000478!1.63e-17!24;UBERON:0000305!1.06e-07!7;UBERON:0004923!3.68e-07!57;UBERON:0004871!7.66e-07!8 | |ontology_enrichment_uberon=UBERON:0000476!2.08e-36!3;UBERON:0000920!2.08e-36!3;UBERON:0005631!3.35e-30!14;UBERON:0000158!3.35e-30!14;UBERON:0003124!1.58e-27!7;UBERON:0000478!1.63e-17!24;UBERON:0000305!1.06e-07!7;UBERON:0004923!3.68e-07!57;UBERON:0004871!7.66e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.28e-53;3!UBERON:0000920;1.28e-53;3!UBERON:0005631;2.40e-36;10!UBERON:0000158;2.40e-36;10!UBERON:0000478;1.02e-15;24!UBERON:0000305;5.70e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.28e-53,3;UBERON:0005631,2.90e-26,14;UBERON:0000158,2.90e-26,14;UBERON:0003124,1.02e-23,7;UBERON:0000478,1.02e-15,24;UBERON:0000305,5.70e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.31103490476991,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,59.6532168698689,0.457987967009312,14.3919389525031,0,1.56980256395025,1.32969345520125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533458648470704,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.31103490476991,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,59.6532168698689,0.457987967009312,14.3919389525031,0,1.56980256395025,1.32969345520125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533458648470704,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@CU675194 | |short_description=p1@CU675194 | ||
}} | }} |
Latest revision as of 22:55, 23 July 2015
Short description: | p1@CU675194 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU675194_5end |
Coexpression cluster: | C289_chorionic_skeletal_heart_Mast_amniotic_granulosa_left |
Association with transcript: | -55bp_to_CU675194_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.28e-53 | 3 |
extraembryonic cell | 1.31e-19 | 19 |
amnion mesenchymal stem cell | 2.97e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.28e-53 | 3 |
extraembryonic membrane | 2.90e-26 | 14 |
membranous layer | 2.90e-26 | 14 |
chorion | 1.02e-23 | 7 |
extraembryonic structure | 1.02e-15 | 24 |
amnion | 5.70e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 3.30e-40 | 1 |