FFCP PHASE1:Hg19::chr11:57156114..57156132,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:57156114..57156132,- | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_at_chr11:57156114..57156132,- | |description=CAGE_peak_at_chr11:57156114..57156132,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002541!1.85e-25!3 | |ontology_enrichment_celltype=CL:0002541!1.85e-25!3 | ||
|ontology_enrichment_celltype_v019=CL:0002541;5.00e-45;3!CL:0000349;1.75e-16;19!CL:0002537;6.13e-08;5 | |ontology_enrichment_celltype_v019=CL:0002541;5.00e-45;3!CL:0000349;1.75e-16;19!CL:0002537;6.13e-08;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,5.00e-45,3;CL:0000349,1.75e-16,19;CL:0002537,6.13e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0003124;5.05e-34;1 | |ontology_enrichment_development_v019=UBERON:0003124;5.05e-34;1 | ||
|ontology_enrichment_disease=DOID:8552!1.12e-09!1;DOID:225!1.32e-09!1 | |ontology_enrichment_disease=DOID:8552!1.12e-09!1;DOID:225!1.32e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:8552;8.34e-34;1 | |ontology_enrichment_disease_v019=DOID:8552;8.34e-34;1 | ||
|ontology_enrichment_disease_v019_2=DOID:8552,7.06e-34,1 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.85e-25!3;UBERON:0000920!1.85e-25!3;UBERON:0003124!3.32e-19!7;UBERON:0005631!1.01e-14!14;UBERON:0000158!1.01e-14!14;UBERON:0004177!1.61e-10!7;UBERON:0002370!1.04e-08!4;UBERON:0005058!1.04e-08!4;UBERON:0009113!1.04e-08!4;UBERON:0003295!1.04e-08!4;UBERON:0005562!1.04e-08!4;UBERON:0000478!1.66e-08!24;UBERON:0000974!1.33e-07!10 | |ontology_enrichment_uberon=UBERON:0000476!1.85e-25!3;UBERON:0000920!1.85e-25!3;UBERON:0003124!3.32e-19!7;UBERON:0005631!1.01e-14!14;UBERON:0000158!1.01e-14!14;UBERON:0004177!1.61e-10!7;UBERON:0002370!1.04e-08!4;UBERON:0005058!1.04e-08!4;UBERON:0009113!1.04e-08!4;UBERON:0003295!1.04e-08!4;UBERON:0005562!1.04e-08!4;UBERON:0000478!1.66e-08!24;UBERON:0000974!1.33e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;5.00e-45;3!UBERON:0000920;5.00e-45;3!UBERON:0005631;1.68e-30;10!UBERON:0000158;1.68e-30;10!UBERON:0000478;1.30e-22;24!UBERON:0001987;1.44e-09;4 | |ontology_enrichment_uberon_v019=UBERON:0003124;5.00e-45;3!UBERON:0000920;5.00e-45;3!UBERON:0005631;1.68e-30;10!UBERON:0000158;1.68e-30;10!UBERON:0000478;1.30e-22;24!UBERON:0001987;1.44e-09;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,5.00e-45,3;UBERON:0003124,4.53e-43,7;UBERON:0005631,3.38e-38,14;UBERON:0000158,3.38e-38,14;UBERON:0000478,1.30e-22,24;UBERON:0001987,1.44e-09,4;UBERON:0004340,1.44e-09,4;UBERON:0004923,1.32e-08,66 | |||
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|short_description=p@chr11:57156114..57156132,- | |short_description=p@chr11:57156114..57156132,- | ||
}} | }} |
Latest revision as of 22:55, 23 July 2015
Short description: | p@chr11:57156114..57156132, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:57156114..57156132, - |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 5.00e-45 | 3 |
extraembryonic cell | 1.75e-16 | 19 |
amnion mesenchymal stem cell | 6.13e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 5.00e-45 | 3 |
chorion | 4.53e-43 | 7 |
extraembryonic membrane | 3.38e-38 | 14 |
membranous layer | 3.38e-38 | 14 |
extraembryonic structure | 1.30e-22 | 24 |
placenta | 1.44e-09 | 4 |
allantois | 1.44e-09 | 4 |
organ component layer | 1.32e-08 | 66 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 7.06e-34 | 1 |