FFCP PHASE1:Hg19::chr11:61605283..61605303,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:61605283..61605303,+ | |||
|coexpression_cluster_id=C315 | |coexpression_cluster_id=C315 | ||
|description=CAGE_peak_at_chr11:61605283..61605303,+ | |description=CAGE_peak_at_chr11:61605283..61605303,+ | ||
|id=chr11:61605283..61605303,+ | |id=chr11:61605283..61605303,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.55e-12!180;CL:0000144!5.96e-11!625;CL:0002371!3.21e-10!591;CL:0000057!8.62e-09!75;CL:0000548!2.68e-08!679;CL:0000004!2.68e-08!679;CL:0000255!2.68e-08!679;CL:0000012!8.73e-08!682;CL:0002321!5.52e-07!248;CL:0000220!7.22e-07!246 | |ontology_enrichment_celltype=CL:0000055!1.55e-12!180;CL:0000144!5.96e-11!625;CL:0002371!3.21e-10!591;CL:0000057!8.62e-09!75;CL:0000548!2.68e-08!679;CL:0000004!2.68e-08!679;CL:0000255!2.68e-08!679;CL:0000012!8.73e-08!682;CL:0002321!5.52e-07!248;CL:0000220!7.22e-07!246 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.29e-07,76;CL:0000393,2.25e-07,61;CL:0000211,2.25e-07,61;CL:0002321,4.01e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.12e-08!143;UBERON:0000119!4.87e-08!312;UBERON:0000483!1.24e-07!309;UBERON:0000475!1.30e-07!365 | |ontology_enrichment_uberon=UBERON:0005256!1.12e-08!143;UBERON:0000119!4.87e-08!312;UBERON:0000483!1.24e-07!309;UBERON:0000475!1.30e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0006876;5.67e-09;11!UBERON:0003688;3.98e-07;6!UBERON:0002358;3.98e-07;6!UBERON:0003684;3.98e-07;6!UBERON:0001178;3.98e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006876,5.68e-09,11;UBERON:0007503,3.03e-08,78;UBERON:0005256,9.15e-08,122;UBERON:0003104,1.16e-07,160;UBERON:0009142,1.16e-07,160;UBERON:0000483,2.31e-07,306;UBERON:0000119,4.13e-07,309;UBERON:0002100,6.04e-07,199;UBERON:0002329,9.40e-07,71;UBERON:0003059,9.40e-07,71;UBERON:0007282,9.40e-07,71;UBERON:0004290,9.40e-07,71;UBERON:0009618,9.40e-07,71 | |||
|phase1_expression=0.726713517082227,7.27941781229343,2.11431606143957,1.0007329835313,3.5756887554183,3.48935409640147,0,1.89515962028049,3.13422753839806,0,4.18680700783456,0.655324116390517,0.263766978228454,0.618831764800233,1.65698687863958,2.01697543935533,0.602694528023977,0,0,0.492484232307152,1.83600622119828,1.56727360739044,0,3.42186062682211,3.01302335027527,0.458480434487708,0.328402357799783,0.314843125254717,0,0,0,1.83884244895785,2.71085326900425,1.84877005083394,0,0,0,0,0,0,0,0.32389366601898,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0.211255286311942,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.334231370655521,0,0,0,0.768547918354051,0,0,0,0.289803085735052,0,0,0,0.453237370790265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.639312809217652,0,0,0,0,0,1.13441780596881,4.21285855178871,3.24988707064566,0.0654895377488563,0.728590576585084,1.11235332835329,0.324547393654683,0.348259474598534,1.72845348674525,0,0,0,0.596287222100115,0.860234595106124,0,0,0.419499436209906,0.825354125820202,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0,0.488124115096339,0.367663080345869,0.81014194788176,0.446498641420399,0.22452937262617,0.563057402416611,1.53316637465883,1.89853131913626,1.46561395144326,0,0,0,0.496971951695318,0.759783069987479,0.264818361626438,1.43418310374407,0.709336764396714,2.24271040056923,0,0.49333509683432,0.311211035399766,2.55950276932407,3.26923806226917,0.302714855289863,2.30470369792,0.234321431833797,1.24864030732128,0,1.64393548606981,3.75790395660048,2.5899671098901,3.79217178096071,1.63323337003915,7.37005903870608,1.85986406116378,0,1.97813543422845,0,1.43723628363248,1.0100166837244,4.00379263590285,0,0.877955241761676,1.83892677479412,1.35214253015937,0.567160915800105,0.89694817844431,0.213557388818567,1.05965950579781,0.300091096084402,0,0.257640540045629,0.18611685633159,0,0,0.252433774244115,0,1.13152239773168,1.42003837006646,0.302256294682921,0.339121184620975,1.15956511897978,0,1.14721838155602,0.487894824518382,0.265059536642971,0.348581828608555,0.310983165046111,0.756962552626885,0.72995471815166,0,2.57296375277154,0,1.85747171212792,4.33127689001751,0.354920400119532,0.168584690078102,0.723033089650446,0.55146986366197,0.217879444092406,0,0.269662616320329,0.196221465125346,0.38474715694639,2.21446636387394,0,2.4694440679884,5.88034845542168,2.53510069643662,0,0,0.441463099414651,0.245976877086227,0.514703430895577,1.53650399572076,0,0.502644862058154,0.185176890317059,0,5.19967392639789,1.44331342025273,0.34779121492523,0.117408694235822,0.288732895522148,0.462985512576611,0.190254152234598,0,0,0.492434012174795,0.234004265139238,0.891786973732369,0.93733833986777,0.839910640994298,0.283550194484773,0,0.290633938513962,0,0.492663237895943,0.880484340132261,0,0.144119953416961,0,0.190493682876507,0,0,3.4214489204541,1.02827492703324,0,1.42913216315289,0.448524337381443,0.87192013766656,0.80672114403045,0.387815147273333,7.15312891703765,1.690605505112,1.59562869950922,1.04007436911366,0.257207374262142,0,1.3321108950805,1.28680194292333,1.62786481617433,3.29296134712308,0.65147236858747,3.19852753868291,0,0,0,0.99972991182057,0,0.502257091432126,0,0.239624855491583,2.29723871668228,0,0.144781306667579,0.821905290201534,0,0,0,0,0,0.254094624222463,0,3.09315525111078,0,1.91381625495949,0,0,0,0.49076596687656,4.00136416847742,0.813795071099207,0.831883446123229,2.3195768543631,0.473107245101804,0.468565659970853,0,31.8370505678379,4.1389228517002,0,0.368738337083406,1.30325421702124,2.54541504701563,1.71571711905428,0,0,0.106727557803444,0,1.66435439510497,2.11673205330776,0.992431231275107,0.306923946576125,3.64858122762996,1.40953064181271,1.02341449813341,1.12597744800525,2.96836132889982,0.462629081407967,0.532685175939381,0.0821271560138091,0,0.116210378459959,0.241718899183244,1.60405176242628,0.184161977871793,0.918515585316854,1.0925470080403,2.62248829918848,0,0.847168708148562,1.56869953835371,2.92278449306521,0.73886140225013,1.13733384070897,2.2112181685947,0.647747748306418,0,0.812839312631559,2.50844886927427,0,1.66215201785745,2.68649705666614,0.219259876645935,0.784306353074702,1.28225062558195,0.328014645699706,0.650756789328606,0.721287081534056,1.00726411300178,0.41254749960294,0.574265537996172,1.30012049207304,0,0,0.770243085573222,2.30255512089194,1.92971201478343,1.07420244868274,3.62541734785571,0.852266274161009,0.0890320356467374,0.330569830721956,1.15314040419064,0.127612712494584,0,0,0.31481234683064,0,0,0.532306030317022,0,0.18532421910392,0.143124886741991,2.60510858551767,1.58189712359363,3.0500831027812,1.02359116524534,1.28381696410176,0,1.56989728039846,0.899362287916574,6.58888871366531,4.24124648444471,0.404364963146632,0,0,0.975267478179181,0.487426979262569,1.05650146756755,0.818999468447914,2.2624869112594,0,0,0,0.438450885253763,4.05142873986681,1.31178950409327,0,1.8589409885985,2.2535648202579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| ||
|short_description=p@chr11:61605283..61605303,+ | |short_description=p@chr11:61605283..61605303,+ | ||
}} | }} |
Latest revision as of 23:31, 23 July 2015
Short description: | p@chr11:61605283..61605303, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:61605283..61605303, + |
Coexpression cluster: | C315_Osteoblast_Preadipocyte_mesenchymal_Smooth_Cardiac_leiomyoma_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.29e-07 | 76 |
electrically responsive cell | 2.25e-07 | 61 |
electrically active cell | 2.25e-07 | 61 |
embryonic cell | 4.01e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
vasculature of organ | 5.68e-09 | 11 |
epithelial vesicle | 3.03e-08 | 78 |
trunk mesenchyme | 9.15e-08 | 122 |
mesenchyme | 1.16e-07 | 160 |
entire embryonic mesenchyme | 1.16e-07 | 160 |
epithelium | 2.31e-07 | 306 |
cell layer | 4.13e-07 | 309 |
trunk | 6.04e-07 | 199 |
somite | 9.40e-07 | 71 |
presomitic mesoderm | 9.40e-07 | 71 |
presumptive segmental plate | 9.40e-07 | 71 |
dermomyotome | 9.40e-07 | 71 |
trunk paraxial mesoderm | 9.40e-07 | 71 |