FFCP PHASE1:Hg19::chr11:86624313..86624317,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:86624313..86624317,- | |||
|coexpression_cluster_id=C29 | |coexpression_cluster_id=C29 | ||
|description=CAGE_peak_at_chr11:86624313..86624317,- | |description=CAGE_peak_at_chr11:86624313..86624317,- | ||
|id=chr11:86624313..86624317,- | |id=chr11:86624313..86624317,- | ||
|ontology_enrichment_celltype=CL:0000136!7.51e-09!15 | |ontology_enrichment_celltype=CL:0000136!7.51e-09!15 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.63e-26;13!CL:0002615;6.16e-17;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,7.48e-23,15;CL:0002615,8.83e-17,3;CL:0002616,7.39e-07,1;CL:0002581,9.25e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;5.10e-07;1!UBERON:0005754;5.10e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;3.94e-07;1!DOID:4549;3.94e-07;1!DOID:5861;3.94e-07;1!DOID:6496;3.94e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,3.95e-07,1;DOID:4549,3.95e-07,1;DOID:5861,3.95e-07,1;DOID:6496,3.95e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.15e-23!115;UBERON:0001049!5.28e-10!57;UBERON:0005068!5.28e-10!57;UBERON:0006241!5.28e-10!57;UBERON:0007135!5.28e-10!57;UBERON:0003080!1.01e-09!42;UBERON:0002346!1.35e-09!90;UBERON:0001950!4.04e-09!20;UBERON:0002619!4.36e-09!22;UBERON:0002780!5.61e-09!41;UBERON:0001890!5.61e-09!41;UBERON:0006240!5.61e-09!41;UBERON:0003075!5.62e-09!86;UBERON:0007284!5.62e-09!86;UBERON:0001871!1.46e-08!7;UBERON:0002020!4.23e-08!34;UBERON:0003528!4.23e-08!34;UBERON:0001869!7.32e-08!32;UBERON:0002616!7.77e-08!59;UBERON:0001893!8.28e-08!34;UBERON:0000956!1.73e-07!25;UBERON:0000203!1.73e-07!25;UBERON:0002791!1.83e-07!33;UBERON:0000468!2.76e-07!659;UBERON:0005743!3.95e-07!86;UBERON:0004458!7.52e-07!49;UBERON:0004111!8.13e-07!241;UBERON:0003101!9.12e-07!22;UBERON:0000079!9.12e-07!22;UBERON:0001017!9.67e-07!82;UBERON:0004457!9.72e-07!12;UBERON:0000042!9.72e-07!12 | |ontology_enrichment_uberon=UBERON:0007023!2.15e-23!115;UBERON:0001049!5.28e-10!57;UBERON:0005068!5.28e-10!57;UBERON:0006241!5.28e-10!57;UBERON:0007135!5.28e-10!57;UBERON:0003080!1.01e-09!42;UBERON:0002346!1.35e-09!90;UBERON:0001950!4.04e-09!20;UBERON:0002619!4.36e-09!22;UBERON:0002780!5.61e-09!41;UBERON:0001890!5.61e-09!41;UBERON:0006240!5.61e-09!41;UBERON:0003075!5.62e-09!86;UBERON:0007284!5.62e-09!86;UBERON:0001871!1.46e-08!7;UBERON:0002020!4.23e-08!34;UBERON:0003528!4.23e-08!34;UBERON:0001869!7.32e-08!32;UBERON:0002616!7.77e-08!59;UBERON:0001893!8.28e-08!34;UBERON:0000956!1.73e-07!25;UBERON:0000203!1.73e-07!25;UBERON:0002791!1.83e-07!33;UBERON:0000468!2.76e-07!659;UBERON:0005743!3.95e-07!86;UBERON:0004458!7.52e-07!49;UBERON:0004111!8.13e-07!241;UBERON:0003101!9.12e-07!22;UBERON:0000079!9.12e-07!22;UBERON:0001017!9.67e-07!82;UBERON:0004457!9.72e-07!12;UBERON:0000042!9.72e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0005406;1.25e-11;2!UBERON:0000922;2.40e-09;49!UBERON:0003688;1.02e-08;6!UBERON:0002358;1.02e-08;6!UBERON:0003684;1.02e-08;6!UBERON:0001178;1.02e-08;6!UBERON:0006947;1.57e-08;3!UBERON:0004054;1.57e-08;3!UBERON:0003978;4.88e-08;3!UBERON:0000946;4.88e-08;3!UBERON:0005795;5.10e-07;1!UBERON:0007029;5.10e-07;1!UBERON:0001000;5.10e-07;1!UBERON:0000998;5.10e-07;1!UBERON:0006868;5.10e-07;1!UBERON:0002426;5.10e-07;1!UBERON:0003831;5.10e-07;1!UBERON:0003898;5.10e-07;1!UBERON:0004830;5.10e-07;1!UBERON:0003830;5.10e-07;1!UBERON:0005175;5.10e-07;1!UBERON:0001774;5.10e-07;1!UBERON:0001103;5.10e-07;1!UBERON:0005352;5.10e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,5.84e-12,2;UBERON:0003688,1.21e-08,6;UBERON:0002358,1.21e-08,6;UBERON:0003684,1.21e-08,6;UBERON:0001178,1.21e-08,6;UBERON:0006947,1.52e-08,3;UBERON:0004054,1.52e-08,3;UBERON:0003978,5.85e-08,3;UBERON:0009751,5.85e-08,3;UBERON:0000946,5.85e-08,3;UBERON:0002523,5.85e-08,3;UBERON:0005983,5.85e-08,3;UBERON:0002165,5.85e-08,3;UBERON:0002062,5.85e-08,3;UBERON:0007280,5.85e-08,3;UBERON:0004145,6.06e-08,3;UBERON:0000998,4.43e-07,1;UBERON:0006868,4.43e-07,1;UBERON:0007029,4.69e-07,1;UBERON:0002426,5.26e-07,1;UBERON:0003831,5.26e-07,1;UBERON:0003898,5.26e-07,1;UBERON:0004830,5.26e-07,1;UBERON:0003830,5.26e-07,1;UBERON:0005175,5.26e-07,1;UBERON:0001774,5.26e-07,1;UBERON:0001103,5.26e-07,1;UBERON:0010084,5.26e-07,1;UBERON:0001000,5.57e-07,1;UBERON:0005352,5.57e-07,1 | |||
|phase1_expression=0.363356758541113,0.428201047781966,1.26858963686374,2.00146596706261,1.34088328328186,1.74467704820074,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0.270803863765016,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0.208994966536811,0.516833518338658,0,0,0,0,0.24406205754817,0,0,0.357198913136319,0.898117490504679,0.337834441449967,0,0,0.183201743930407,0,0,0,0,0.379891534993739,0.529636723252875,0.286836620748814,0.354668382198357,0,0,0,0,0.404132016209064,0.163461903113459,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0.423863802319124,0,0.103052529238439,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.258543431515556,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0.499864955910285,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.768834895534206,0,0.321707842287215,1.48418066444991,0,0,0,0,0.116210378459959,0.241718899183244,0,0,0,0.364182336013434,0.655622074797121,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0.165018999841176,0,0,0,0,0,0,0,0.214840489736547,0.290033387828457,0,0,0,0,0.127612712494584,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.633322905892992,0.329294892959902,0,0,0,0.670302275535787,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75809815126273,0,0,0,0,0,0,0.994147647766298,0.984685914873589,0,0,0.422250816255987,1.19548792950642,0.276283915531148,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0.61221999997337,1.44999915086959,0,0,0,0.344743373241465,0.291604613383254,0,0,0.241192877250816,0,0.221158519862449,0,0.219385397153973,0.21787692703798,0,1.23120413606075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0.611030144933625,0.296521128680622,0,0,0.067401132980677,2.40773294189637,0.468528891450678,0,0,0.485560759068186,2.36750641709634,2.41981432097328,0.61214552326098,0.189559738885464,0,0,0,0,0,1.19472429772959,0,0,0,0,0,0.698906672968121,0,0,0.0730893170861856,0,0.290967049465258,3.44198894096851,0.677942222341597,0,0,0.126621591911757,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,1.14580212005842,1.43574604915363,0,0,0.446342914883745,0.268733889946905,0.360299883542404,0,0.0787831823072236,0,0,0,0,0,0.272406812223151,0.160753148465019,0,0,0,0,0.0607495566580247,0,0.394028536495991,0.314727528809989,0,0.179287339332845,0,0,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0.747511887973863,1.41483874589699,0.828478110694391,0,0,0,0,8.70428485391158,5.013797880454,7.65863941908654,4.59021682993726,0,0,0.366078794705889,0.250381861413,0,0.110929051536852,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0,0,0,0.318593534327405,0,0,0.414706207840855,0.265841714557995,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629063767423586,0,0,1.06287460050841,0.867550349813015,0,0.318004350653419,0,0,0,0.6124909547064,0.128458450192919,0,0.798169295285756,0.41023272848151,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.526472298444801,0,0.781514011233092,0,0.163771917510097,0,0.0675375846183947,0,0.206686796501184,0.19024743058172,0.546974809018219,0,0.992422356778588,0,0.127762427639595,0,0,0,0.682986574053893,0,0,0,0.0679697329768317,0,0,1.00108261702862,0.470958557103084,0.157115589916002,0,4.56579360254748,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,2.54032230114557,0,0,0,0,0,0,0.647428837187895,0.513314034281235,0,2.4285549652957,0,0.198950775161368,0,0,0,0,0,0.437119121007915,0,1.22574160876953,0,0.196308467114945,0.594092800654172,0,0.169927114687817,0.281951753939561,0,0,0,0,0,0,0,0,0.788857810965923,0.271965960763659,0,1.5870805215462,0,0,0,0,0,0,0,0.26721740526556,0.459474497674225,0,0.227336094654718,0.267964130156178,0.829169439458779,0.103432995861895,1.27940389140589,0.952257725854961,0,0,0,0.0636471582781649,1.61693751166575,0.870866991587845,1.36893320434112,0,0.0717222053926763,1.66330178273007,0,0,0,0,2.3464094240345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| ||
|short_description=p@chr11:86624313..86624317,- | |short_description=p@chr11:86624313..86624317,- | ||
}} | }} |
Latest revision as of 03:20, 24 July 2015
Short description: | p@chr11:86624313..86624317, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:86624313..86624317, - |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 7.48e-23 | 15 |
adipocyte of omentum tissue | 8.83e-17 | 3 |
perirenal adipocyte cell | 7.39e-07 | 1 |
perirenal preadipocyte | 9.25e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 5.84e-12 | 2 |
omentum | 1.21e-08 | 6 |
peritoneum | 1.21e-08 | 6 |
abdominal cavity | 1.21e-08 | 6 |
visceral peritoneum | 1.21e-08 | 6 |
male genital duct | 1.52e-08 | 3 |
internal male genitalia | 1.52e-08 | 3 |
valve | 5.85e-08 | 3 |
cardiac mesenchyme | 5.85e-08 | 3 |
cardial valve | 5.85e-08 | 3 |
tunica intima | 5.85e-08 | 3 |
heart layer | 5.85e-08 | 3 |
endocardium | 5.85e-08 | 3 |
endocardial cushion | 5.85e-08 | 3 |
presumptive endocardium | 5.85e-08 | 3 |
outflow tract | 6.06e-08 | 3 |
seminal vesicle | 4.43e-07 | 1 |
seminal fluid secreting gland | 4.43e-07 | 1 |
surface | 4.69e-07 | 1 |
chest muscle | 5.26e-07 | 1 |
respiratory system muscle | 5.26e-07 | 1 |
skeletal muscle of trunk | 5.26e-07 | 1 |
respiratory system skeletal muscle | 5.26e-07 | 1 |
thoracic segment muscle | 5.26e-07 | 1 |
chest organ | 5.26e-07 | 1 |
muscle of trunk | 5.26e-07 | 1 |
diaphragm | 5.26e-07 | 1 |
future diaphragm | 5.26e-07 | 1 |
vas deferens | 5.57e-07 | 1 |
spermatic cord | 5.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 3.95e-07 | 1 |
extraosseous chondrosarcoma | 3.95e-07 | 1 |
myxoid chondrosarcoma | 3.95e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 3.95e-07 | 1 |