FFCP PHASE1:Hg19::chr11:86649555..86649566,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:86649555..86649566,- | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_at_chr11:86649555..86649566,- | |description=CAGE_peak_at_chr11:86649555..86649566,- | ||
|id=chr11:86649555..86649566,- | |id=chr11:86649555..86649566,- | ||
|ontology_enrichment_celltype=CL:0002139!1.32e-16!24;CL:1000306!1.50e-14!4;CL:0002547!1.50e-14!4;CL:0000071!4.66e-12!18;CL:0002546!4.66e-12!18;CL:0002592!8.66e-12!3;CL:0000222!1.08e-11!119;CL:0000115!1.27e-10!35;CL:1000413!2.97e-10!9;CL:0000359!1.77e-09!32;CL:0002589!2.40e-08!2;CL:0000192!2.77e-08!42;CL:0000514!2.77e-08!42;CL:0002078!5.70e-08!44;CL:0000213!8.44e-07!57;CL:0000215!8.44e-07!57 | |ontology_enrichment_celltype=CL:0002139!1.32e-16!24;CL:1000306!1.50e-14!4;CL:0002547!1.50e-14!4;CL:0000071!4.66e-12!18;CL:0002546!4.66e-12!18;CL:0002592!8.66e-12!3;CL:0000222!1.08e-11!119;CL:0000115!1.27e-10!35;CL:1000413!2.97e-10!9;CL:0000359!1.77e-09!32;CL:0002589!2.40e-08!2;CL:0000192!2.77e-08!42;CL:0000514!2.77e-08!42;CL:0002078!5.70e-08!44;CL:0000213!8.44e-07!57;CL:0000215!8.44e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002592;5.96e-34;3!CL:0000138;7.67e-18;6!CL:0000153;2.19e-12;9!CL:0000447;2.19e-12;9!CL:0000327;5.55e-08;15!CL:0002494;1.54e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002592,5.96e-34,3;CL:0000058,7.67e-18,6;CL:0000138,7.67e-18,6;CL:0000153,2.19e-12,9;CL:0000447,2.19e-12,9;CL:0000327,5.55e-08,15;CL:0002494,1.54e-07,16 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;9.37e-99;1!DOID:4549;9.37e-99;1!DOID:5861;9.37e-99;1!DOID:6496;9.37e-99;1!DOID:201;7.67e-18;6!DOID:0060100;7.67e-18;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,9.37e-99,1;DOID:4549,9.37e-99,1;DOID:5861,9.37e-99,1;DOID:6496,9.37e-99,1;DOID:201,7.67e-18,6;DOID:0060100,7.67e-18,6 | |||
|ontology_enrichment_uberon=UBERON:0001637!6.52e-33!42;UBERON:0003509!6.52e-33!42;UBERON:0004572!6.52e-33!42;UBERON:0000055!8.44e-32!69;UBERON:0001981!6.58e-29!60;UBERON:0007500!6.58e-29!60;UBERON:0004537!6.58e-29!60;UBERON:0006965!6.58e-29!60;UBERON:0002049!7.16e-27!79;UBERON:0007798!7.16e-27!79;UBERON:0004872!2.00e-24!84;UBERON:0004573!2.59e-21!33;UBERON:0004571!2.59e-21!33;UBERON:0004535!1.94e-20!110;UBERON:0001009!1.07e-19!113;UBERON:0003914!6.12e-17!118;UBERON:0000415!1.50e-14!4;UBERON:0007240!1.50e-14!4;UBERON:0005742!1.50e-14!4;UBERON:0005734!1.50e-14!4;UBERON:0004664!1.50e-14!4;UBERON:0004663!1.50e-14!4;UBERON:0000947!2.41e-12!21;UBERON:0010191!2.41e-12!21;UBERON:0001986!4.66e-12!18;UBERON:0004638!4.66e-12!18;UBERON:0004852!4.66e-12!18;UBERON:0003498!5.87e-12!5;UBERON:0005985!5.87e-12!5;UBERON:0001621!8.66e-12!3;UBERON:0003915!2.97e-10!9;UBERON:0004700!2.97e-10!9;UBERON:0001917!2.97e-10!9;UBERON:0000487!1.32e-09!22;UBERON:0000490!5.22e-09!138;UBERON:0000025!2.37e-08!194;UBERON:0001529!2.40e-08!2;UBERON:0007204!2.40e-08!2;UBERON:0006914!2.77e-08!25;UBERON:0004111!3.83e-08!241;UBERON:0000477!4.14e-08!286;UBERON:0003081!1.76e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;4.27e-34;3!UBERON:0004755;4.27e-34;3!UBERON:0003498;5.96e-34;3!UBERON:0005985;5.96e-34;3!UBERON:0001621;5.96e-34;3!UBERON:0001474;7.18e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,4.27e-34,3;UBERON:0004755,4.27e-34,3;UBERON:0001621,5.96e-34,3;UBERON:0003498,5.15e-21,5;UBERON:0005985,5.15e-21,5 | |||
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| ||
|short_description=p@chr11:86649555..86649566,- | |short_description=p@chr11:86649555..86649566,- | ||
}} | }} |
Latest revision as of 03:20, 24 July 2015
Short description: | p@chr11:86649555..86649566, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:86649555..86649566, - |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 5.96e-34 | 3 |
chondroblast | 7.67e-18 | 6 |
chondrocyte | 7.67e-18 | 6 |
GAG secreting cell | 2.19e-12 | 9 |
carbohydrate secreting cell | 2.19e-12 | 9 |
extracellular matrix secreting cell | 5.55e-08 | 15 |
cardiocyte | 1.54e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 4.27e-34 | 3 |
skeletal tissue | 4.27e-34 | 3 |
coronary artery | 5.96e-34 | 3 |
heart blood vessel | 5.15e-21 | 5 |
coronary vessel | 5.15e-21 | 5 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 9.37e-99 | 1 |
extraosseous chondrosarcoma | 9.37e-99 | 1 |
myxoid chondrosarcoma | 9.37e-99 | 1 |
extraskeletal myxoid chondrosarcoma | 9.37e-99 | 1 |
connective tissue cancer | 7.67e-18 | 6 |
musculoskeletal system cancer | 7.67e-18 | 6 |