FFCP PHASE1:Hg19::chr12:104319248..104319257,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:104319248..104319257,+ | |||
|description=CAGE_peak_at_chr12:104319248..104319257,+ | |description=CAGE_peak_at_chr12:104319248..104319257,+ | ||
|id=chr12:104319248..104319257,+ | |id=chr12:104319248..104319257,+ | ||
|ontology_enrichment_celltype=CL:0000838!9.86e-15!52;CL:0000542!2.18e-14!53;CL:0000051!2.18e-14!53;CL:0000945!8.48e-13!24;CL:0000826!8.48e-13!24;CL:0000080!2.13e-11!6;CL:0002253!2.24e-09!2;CL:0000453!9.34e-08!5 | |ontology_enrichment_celltype=CL:0000838!9.86e-15!52;CL:0000542!2.18e-14!53;CL:0000051!2.18e-14!53;CL:0000945!8.48e-13!24;CL:0000826!8.48e-13!24;CL:0000080!2.13e-11!6;CL:0002253!2.24e-09!2;CL:0000453!9.34e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000946;3.15e-26;1!CL:0000786;3.15e-26;1!CL:0002253;6.43e-14;2!CL:0000945;5.65e-10;24!CL:0002563;1.31e-07;4!CL:0000542;8.49e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,2.78e-26,1;CL:0000786,2.78e-26,1;CL:0000980,2.78e-26,1;CL:0002253,6.43e-14,2;CL:0000785,7.30e-14,2;CL:0000955,7.30e-14,2;CL:0000818,7.30e-14,2;CL:0000954,7.30e-14,2;CL:0000816,7.30e-14,2;CL:0000838,3.57e-12,52;CL:0000542,5.99e-12,53;CL:0000051,5.99e-12,53;CL:0000945,5.74e-10,24;CL:0000826,5.74e-10,24;CL:0000817,1.10e-09,3;CL:0002563,1.31e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000954;7.77e-14;2!CL:0000051;8.49e-07;53 | |||
|ontology_enrichment_disease=DOID:0060058!1.30e-14!10;DOID:3119!3.73e-07!14 | |ontology_enrichment_disease=DOID:0060058!1.30e-14!10;DOID:3119!3.73e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:630;7.62e-26;1!DOID:0050177;7.62e-26;1!DOID:0060060;7.62e-26;1!DOID:0060061;7.62e-26;1!DOID:0050427;7.62e-26;1!DOID:8691;7.62e-26;1!DOID:2355;7.62e-26;1!DOID:74;1.21e-13;2!DOID:0060058;7.67e-11;10!DOID:1287;1.80e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,4.61e-26,1;DOID:0060061,4.61e-26,1;DOID:8691,4.61e-26,1;DOID:630,5.93e-26,1;DOID:0050177,5.93e-26,1;DOID:0050427,5.93e-26,1;DOID:2355,1.26e-25,1;DOID:74,1.55e-13,2;DOID:0060058,7.67e-11,10;DOID:1287,2.04e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001052!5.90e-10!4;UBERON:0004907!4.79e-08!5 | |ontology_enrichment_uberon=UBERON:0001052!5.90e-10!4;UBERON:0004907!4.79e-08!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001052;1.31e-07;4!UBERON:0001242;1.31e-07;4!UBERON:0001262;1.31e-07;4!UBERON:0004786;1.31e-07;4!UBERON:0004808;1.31e-07;4!UBERON:0001277;1.31e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,1.31e-07,4;UBERON:0001242,1.31e-07,4;UBERON:0001262,1.31e-07,4;UBERON:0004786,1.31e-07,4;UBERON:0004808,1.31e-07,4;UBERON:0001277,1.31e-07,4 | |||
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| ||
|short_description=p@chr12:104319248..104319257,+ | |short_description=p@chr12:104319248..104319257,+ | ||
}} | }} |
Latest revision as of 04:14, 24 July 2015
Short description: | p@chr12:104319248..104319257, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:104319248..104319257, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 2.78e-26 | 1 |
plasma cell | 2.78e-26 | 1 |
plasmablast | 2.78e-26 | 1 |
epithelial cell of large intestine | 6.43e-14 | 2 |
mature B cell | 7.30e-14 | 2 |
pre-B-II cell | 7.30e-14 | 2 |
transitional stage B cell | 7.30e-14 | 2 |
small pre-B-II cell | 7.30e-14 | 2 |
immature B cell | 7.30e-14 | 2 |
lymphoid lineage restricted progenitor cell | 3.57e-12 | 52 |
lymphocyte | 5.99e-12 | 53 |
common lymphoid progenitor | 5.99e-12 | 53 |
lymphocyte of B lineage | 5.74e-10 | 24 |
pro-B cell | 5.74e-10 | 24 |
precursor B cell | 1.10e-09 | 3 |
intestinal epithelial cell | 1.31e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
rectum | 1.31e-07 | 4 |
intestinal mucosa | 1.31e-07 | 4 |
wall of intestine | 1.31e-07 | 4 |
gastrointestinal system mucosa | 1.31e-07 | 4 |
gastrointestinal system epithelium | 1.31e-07 | 4 |
intestinal epithelium | 1.31e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 4.61e-26 | 1 |
cutaneous T cell lymphoma | 4.61e-26 | 1 |
mycosis fungoides | 4.61e-26 | 1 |
genetic disease | 5.93e-26 | 1 |
monogenic disease | 5.93e-26 | 1 |
xeroderma pigmentosum | 5.93e-26 | 1 |
anemia | 1.26e-25 | 1 |
hematopoietic system disease | 1.55e-13 | 2 |
lymphoma | 7.67e-11 | 10 |
cardiovascular system disease | 2.04e-07 | 4 |