FFCP PHASE1:Hg19::chr12:104674543..104674573,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:104674543..104674573,- to FFCP PHASE1:Hg19::chr12:104674543..104674573,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-43bp_to_ENST00000549807_5end | |||
|cluster_id=chr12:104674543..104674573,- | |||
|coexpression_cluster_id=C1655 | |||
|description=CAGE_peak_2_at_ENST00000549807_5end | |||
|id=chr12:104674543..104674573,- | |||
|ontology_enrichment_celltype=CL:0000222!1.11e-21!119;CL:0000055!1.52e-17!180;CL:0000548!4.77e-15!679;CL:0000004!4.77e-15!679;CL:0000255!4.77e-15!679;CL:0000012!1.19e-14!682;CL:0000077!7.46e-14!19;CL:0000076!1.20e-13!62;CL:0000192!2.27e-11!42;CL:0000514!2.27e-11!42;CL:0000213!2.62e-11!57;CL:0000215!2.62e-11!57;CL:0000057!3.47e-11!75;CL:0000220!3.61e-11!246;CL:0002321!7.65e-11!248;CL:0000680!8.63e-11!57;CL:0000056!8.63e-11!57;CL:0000355!8.63e-11!57;CL:0000187!1.11e-10!54;CL:0000003!9.38e-10!722;CL:0000183!1.42e-09!59;CL:0000359!1.55e-09!32;CL:0000144!1.02e-08!625;CL:0000393!1.72e-08!60;CL:0000211!1.72e-08!60;CL:0002620!6.99e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000077;2.66e-26;19!CL:1000306;2.75e-10;4!CL:0002547;2.75e-10;4!CL:0002620;2.29e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.68e-26,19;CL:0000222,8.37e-13,121;CL:0000076,1.01e-11,63;CL:0000213,1.62e-11,58;CL:0000215,1.62e-11,58;CL:1000306,2.55e-10,4;CL:0002547,2.55e-10,4;CL:0002620,3.37e-07,23;CL:0000057,7.75e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!3.05e-16!79;UBERON:0007798!3.05e-16!79;UBERON:0004872!2.27e-14!84;UBERON:0001981!2.92e-14!60;UBERON:0007500!2.92e-14!60;UBERON:0004537!2.92e-14!60;UBERON:0006965!2.92e-14!60;UBERON:0000055!6.26e-14!69;UBERON:0004535!2.42e-13!110;UBERON:0001637!4.34e-13!42;UBERON:0003509!4.34e-13!42;UBERON:0004572!4.34e-13!42;UBERON:0000490!8.27e-13!138;UBERON:0001009!1.84e-12!113;UBERON:0003914!8.62e-12!118;UBERON:0004573!8.98e-12!33;UBERON:0004571!8.98e-12!33;UBERON:0000947!2.25e-10!21;UBERON:0010191!2.25e-10!21;UBERON:0001134!2.63e-09!61;UBERON:0002036!2.63e-09!61;UBERON:0003082!2.63e-09!61;UBERON:0002385!1.19e-08!63;UBERON:0001015!1.19e-08!63;UBERON:0000383!1.19e-08!63;UBERON:0000487!1.44e-08!22;UBERON:0004290!1.41e-07!70;UBERON:0000477!2.15e-07!286;UBERON:0006914!7.32e-07!25;UBERON:0000914!9.29e-07!83;UBERON:0002329!9.29e-07!83;UBERON:0003077!9.29e-07!83;UBERON:0003059!9.29e-07!83;UBERON:0007282!9.29e-07!83;UBERON:0009618!9.29e-07!83;UBERON:0007285!9.29e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;2.75e-10;4!UBERON:0000415;2.75e-10;4!UBERON:0007240;2.75e-10;4!UBERON:0005742;2.75e-10;4!UBERON:0005734;2.75e-10;4!UBERON:0004664;2.75e-10;4!UBERON:0004663;2.75e-10;4!UBERON:0000947;3.51e-07;21!UBERON:0010191;3.51e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,2.55e-10,4;UBERON:0007240,2.55e-10,4;UBERON:0005742,2.55e-10,4;UBERON:0005734,2.55e-10,4;UBERON:0004664,2.55e-10,4;UBERON:0004663,2.55e-10,4;UBERON:0000947,2.14e-07,21;UBERON:0010191,2.14e-07,21;UBERON:0004573,2.66e-07,33;UBERON:0004571,2.66e-07,33 | |||
|phase1_expression=1.09007027562334,0.428201047781966,0.563817616383885,1.0007329835313,0,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0.672325146451775,1.80808358407193,0.730310090387373,1.95173119516203,0.123121058076788,0.408001382488506,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.767175371061182,0,0,0,0,0,0.567208902984407,0.443458794925128,0,0,0,0,0,0,0,0,0,0,1.78886166630035,0,0.694281003215189,0.56530794192401,2.93649605346934,0.275118041940067,0.208994966536811,1.03366703667732,1.77883131343355,0,0.402829317109147,0.760272105718513,0.24406205754817,0.367663080345869,0,0.625098097988558,0.673588117878509,0.337834441449967,0,1.89853131913626,0.366403487860815,0,0,0,0.496971951695318,1.51956613997496,7.0176865831006,4.01571269048339,2.4826786753885,2.24271040056923,0,0.49333509683432,0.622422070799533,0.538842688278752,0.980771418680752,0,0.576175924479999,0,0,0,0,0,0.161872944368132,0.140450806702248,0.204154171254893,0.245668634623536,0.309977343527296,0,0.247266929278557,0.910161361938026,0,0.168336113954066,0.125118519871964,0,0.438977620880838,0,0.600952235626387,0.453728732640084,1.61450672119976,0,1.27159140695737,1.20036438433761,0.412210116953756,1.54584324027377,0.744467425326359,0.675105328965065,0.584622030967192,1.00973509697646,0.460249493211497,1.13152239773168,1.42003837006646,1.10827308050404,1.3564847384839,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44375896333917,0.354920400119532,0.168584690078102,0.241011029883482,0.661763836394364,0.217879444092406,0.474541238222193,0.808987848960987,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0.463721619900307,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0.381988425558278,0,0,0,0,0,0,0.87192013766656,0.07333828582095,0.646358578788889,0,0,0.531876233169741,1.04007436911366,0,0,0,1.14382394926518,0,0,0.325736184293735,0.355391948742546,0.791951872933429,3.61727252471503,3.48613383440118,1.29964888536674,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.623912584592421,0.356857977594324,0.473107245101804,0.468565659970853,0,0,1.03473071292505,0.664225598535437,0,0.347534457872331,0,0,0,0,0,0,0,0,1.98486246255021,1.99500565274481,0.841980283299221,0.768834895534206,0,0.804269605718038,0,0,0,0.246381468041427,0,0,0,0,0,1.03333003348146,0.910455840033585,1.96686622439136,0,0.15403067420883,0,0,0.316654886678627,0,0.680374821106063,0.215915916102139,0,0,0,0,0,0,0,0,1.02580050046556,0.328014645699706,0,0,0,0,0,0,3.21367859688319,0,0.308097234229289,0.15350367472613,0,0.429680979473094,0,0.0852266274161009,0,0,0,0.127612712494584,0,0.929691098594572,1.5740617341532,0,0.616067160352178,1.06461206063404,0.869932992075073,0.18532421910392,1.00187420719394,0.372158369359667,0.316379424718726,1.14378116354295,0,0,0.636406495851874,0.78494864019923,1.43897966066652,0.274537029736055,0.471249609382746,0.404364963146632,0,0,0,0,1.05650146756755,1.22849920267187,0.565621727814851,0,0,2.65375590096488,0.876901770507525,1.15755106853338,0,0,0.30982349809975,0.281695602532241,0.860468113224309,0.196498082026242,0.35667105148125,0.709522128141196,0,0,0.379473173765715,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,2.55722532125772,0,0,0,0,0,2.33748280548102,0,0,0.19924798825107,0,0,1.53403023753232,0,1.24415835064723,0.269605053441981,0.179021174675609,0,0,0,1.11136990144637,0,0,0,0,0,0,0.341380344856499,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,4.89161547330224,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.34823682632161,0,1.37588825977293,1.45134496933628,1.60796497589608,1.06750094169172,0,0,0,0.822251547880505,0.794858446811959,0,0,1.20238230377301,0,0,0,0,0,0,5.96412170714076,0,0.815425236441684,1.04602846312333,1.52997326454483,0.866851769704557,0,0,0,2.57859264851974,0,0,0,0,0,0,0,0,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422401346077626,0,10.1715054579306,0,0,0,1.62899880526114,3.45688596480507,0.326587360109409,4.7892076624995,0,0.511164065356265,0.226624183040251,0,0,0,0,0,3.52407511158336,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0.303298235083296,0,1.88212655758537,0,0,0.298509605773748,0.467426619694449,0.554805861502613,0.568209015825267,0.50313580350515,0,4.57680136793847,2.11723293268535,0,0.147855149989634,0.796483835818512,0,0.465788870628778,0.414706207840855,2.92425886013794,0,0.601030435988874,1.90402606084398,0.406870733204662,0.363697318405119,0.644463342254931,3.7122700790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| ||
|short_description=p2@ENST00000549807 | |||
}} | }} |
Latest revision as of 04:17, 24 July 2015
Short description: | p2@ENST00000549807 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000549807_5end |
Coexpression cluster: | C1655_large_mesothelioma_Fibroblast_giant_oral_mesenchymal_mucinous |
Association with transcript: | -43bp_to_ENST00000549807_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.68e-26 | 19 |
mesodermal cell | 8.37e-13 | 121 |
squamous epithelial cell | 1.01e-11 | 63 |
lining cell | 1.62e-11 | 58 |
barrier cell | 1.62e-11 | 58 |
fibroblast of tunica adventitia of artery | 2.55e-10 | 4 |
fibroblast of the aortic adventitia | 2.55e-10 | 4 |
skin fibroblast | 3.37e-07 | 23 |
fibroblast | 7.75e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
artery wall | 2.55e-10 | 4 |
tunica adventitia of artery | 2.55e-10 | 4 |
adventitia | 2.55e-10 | 4 |
tunica adventitia of blood vessel | 2.55e-10 | 4 |
aorta tunica adventitia | 2.55e-10 | 4 |
aorta wall | 2.55e-10 | 4 |
aorta | 2.14e-07 | 21 |
aortic system | 2.14e-07 | 21 |
systemic artery | 2.66e-07 | 33 |
systemic arterial system | 2.66e-07 | 33 |