FFCP PHASE1:Hg19::chr12:104674575..104674595,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:104674575..104674595,- to FFCP PHASE1:Hg19::chr12:104674575..104674595,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-75bp_to_ENST00000549807_5end | |||
|cluster_id=chr12:104674575..104674595,- | |||
|coexpression_cluster_id=C1655 | |||
|description=CAGE_peak_3_at_ENST00000549807_5end | |||
|id=chr12:104674575..104674595,- | |||
|ontology_enrichment_celltype=CL:0000222!1.57e-16!119;CL:0000076!3.05e-16!62;CL:0000213!1.33e-13!57;CL:0000215!1.33e-13!57;CL:0000077!4.21e-12!19;CL:0000548!2.95e-11!679;CL:0000004!2.95e-11!679;CL:0000255!2.95e-11!679;CL:0000012!5.73e-11!682;CL:0000066!9.58e-11!254;CL:0000220!2.27e-09!246;CL:0002321!4.06e-09!248;CL:0002139!5.34e-09!24;CL:0000055!4.18e-08!180;CL:0000057!1.62e-07!75;CL:0000003!2.09e-07!722;CL:0000071!2.50e-07!18;CL:0002546!2.50e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000077;5.63e-23;19!CL:0000076;3.05e-09;63!CL:1000306;3.73e-09;4!CL:0002547;3.73e-09;4!CL:0000213;5.97e-08;58!CL:0000215;5.97e-08;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,4.90e-23,19;CL:0000076,1.36e-15,63;CL:0000213,3.63e-15,58;CL:0000215,3.63e-15,58;CL:1000306,5.45e-09,4;CL:0002547,5.45e-09,4;CL:0000222,9.52e-09,121;CL:0000066,6.04e-08,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.24e-08!106;DOID:2394!3.59e-08!14;DOID:14566!8.09e-08!239;DOID:120!2.89e-07!27;DOID:162!3.61e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004573!1.62e-12!33;UBERON:0004571!1.62e-12!33;UBERON:0000947!2.15e-11!21;UBERON:0010191!2.15e-11!21;UBERON:0000055!2.63e-11!69;UBERON:0001637!5.12e-11!42;UBERON:0003509!5.12e-11!42;UBERON:0004572!5.12e-11!42;UBERON:0002049!2.50e-10!79;UBERON:0007798!2.50e-10!79;UBERON:0001981!8.54e-10!60;UBERON:0007500!8.54e-10!60;UBERON:0004537!8.54e-10!60;UBERON:0006965!8.54e-10!60;UBERON:0000490!4.71e-08!138;UBERON:0001737!2.09e-07!9;UBERON:0001986!2.50e-07!18;UBERON:0004638!2.50e-07!18;UBERON:0004852!2.50e-07!18;UBERON:0004872!3.46e-07!84;UBERON:0006914!5.35e-07!25;UBERON:0003914!5.71e-07!118;UBERON:0004535!8.06e-07!110;UBERON:0001009!9.28e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;3.73e-09;4!UBERON:0000415;3.73e-09;4!UBERON:0007240;3.73e-09;4!UBERON:0005742;3.73e-09;4!UBERON:0005734;3.73e-09;4!UBERON:0004664;3.73e-09;4!UBERON:0004663;3.73e-09;4!UBERON:0005406;1.59e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,5.45e-09,4;UBERON:0007240,5.45e-09,4;UBERON:0005742,5.45e-09,4;UBERON:0005734,5.45e-09,4;UBERON:0004664,5.45e-09,4;UBERON:0004663,5.45e-09,4;UBERON:0005406,8.98e-09,2 | |||
|phase1_expression=0.181678379270557,0,0.704772020479856,0,0,1.74467704820074,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0.975865597581014,0.123121058076788,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0,0,0,0,0,0,0,0,0,1.78886166630035,0,1.73570250803797,1.13061588384802,0.419499436209906,0,0.208994966536811,2.84258435086262,2.84613010149368,0,1.20848795132744,0.760272105718513,0,0.367663080345869,0.81014194788176,0.267899184852239,0.898117490504679,0.225222960966644,0,0.949265659568129,0,0,0,0,0.496971951695318,1.01304409331664,8.87141511448566,1.43418310374407,0.354668382198357,0.560677600142307,0,0,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0.368502951935304,0.103325781175765,0,0,0,0.718618141816238,0,0.125118519871964,0.277064115484183,0,0,0,0.680593098960126,1.25572744982203,0,0.211931901159562,0.600182192168805,0.103052529238439,0.257640540045629,0.37223371266318,1.18143432568886,0,0.757301322732344,0.368199594569197,0.323292113637624,1.06502877754984,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0.482022059766964,0.330881918197182,0.653638332277218,0.237270619111097,0.674156540800822,0.98110732562673,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0,0.514703430895577,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0.288732895522148,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0.531876233169741,0,0,0,0,0.57191197463259,0,0,0,1.06617584622764,0,2.1100756394171,1.74306691720059,0.899756920638513,0,0,0,0,0,0,1.15825045334063,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535286966391485,1.10391690523754,0.234282829985426,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,1.48864684691266,0.920771839728375,0,1.15325234330131,0,0.160853921143607,2.96836132889982,0.154209693802656,0,0,0,0,0,0,0,0.459257792658427,0.182091168006717,0.524497659837696,0,0.231046011313244,0,0,0.105551628892876,0,0.340187410553031,0,0,0.270946437543853,0,0,0,0,0,0,1.28225062558195,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0.464845549297286,0.94443704049192,0,0.308033580176089,0.532306030317022,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0.539617372749944,0.274537029736055,0.117812402345686,0.606547444719948,1.58510321173008,0,0,0.487426979262569,0,0.409499734223957,0.282810863907425,0,0,0,0.876901770507525,0.578775534266688,1.31178950409327,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98895302764489,0,0,0,0,0,1.55832187032068,0,0,0.19924798825107,0,0,1.63629892003448,0,0.311039587661807,0.718946809178615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,3.52196314077761,0,0,0,0,0,0,0,0,0.661983911750998,0,0,0,0,0.173559738335131,0,0.174118413160805,0,1.71986032471617,1.35458863804719,0.950161122120412,0.821154570532092,0,0,0,0,0,0,0,1.68333522528221,0,0,0,0,0,0.14405479798815,5.59136410044446,0,0.543616824294456,0.313808538937,0.917983958726896,0.577901179803038,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,15.928961377514,0,0,0,0,5.18532894720761,0.326587360109409,0,0,0.511164065356265,0.226624183040251,0,0,0,0,0.513260513652988,4.22889013390003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88212655758537,0,0,0,0,0,0,0,0,5.49216164152617,0.302461847526478,0,0,0.63718706865481,0,0.155262956876259,0.829412415681711,0.53168342911599,0.521745061811734,0.751288044986092,0.380805212168795,0.813741466409323,0.181848659202559,0.214821114084977,1.39210127963548,1.59238355479446,0.800055529326307,0,0.336749488765919,1.26184898228651,6.35645440344101,0,0.782982875895635,2.26705925512272,3.00979216620984,0,2.68633261622231,0,1.53498834705095,5.30067437837643,4.43702288023104,13.853280133552,0.256241518587947,0.690860683462397,5.1656192550155,0,0,0,0,0.327609848846413,8.35627889762646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,3.63146558453795,0.235939446695481,0,0.346576998451015,0,0,0,0,0,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.590969204419841,0.333694205676207,0,0,0,0,3.0229862770607,0.9555033757741,0,0,0,0,0,0,0,0,0,0,0.255640214277473,0,0.9164274741762,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,2.14264726326789,0.35289487171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| ||
|short_description=p3@ENST00000549807 | |||
}} | }} |
Latest revision as of 04:17, 24 July 2015
Short description: | p3@ENST00000549807 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000549807_5end |
Coexpression cluster: | C1655_large_mesothelioma_Fibroblast_giant_oral_mesenchymal_mucinous |
Association with transcript: | -75bp_to_ENST00000549807_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 4.90e-23 | 19 |
squamous epithelial cell | 1.36e-15 | 63 |
lining cell | 3.63e-15 | 58 |
barrier cell | 3.63e-15 | 58 |
fibroblast of tunica adventitia of artery | 5.45e-09 | 4 |
fibroblast of the aortic adventitia | 5.45e-09 | 4 |
mesodermal cell | 9.52e-09 | 121 |
epithelial cell | 6.04e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
artery wall | 5.45e-09 | 4 |
tunica adventitia of artery | 5.45e-09 | 4 |
adventitia | 5.45e-09 | 4 |
tunica adventitia of blood vessel | 5.45e-09 | 4 |
aorta tunica adventitia | 5.45e-09 | 4 |
aorta wall | 5.45e-09 | 4 |
perirenal fat | 8.98e-09 | 2 |