FFCP PHASE1:Hg19::chr12:122430186..122430198,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:122430186..122430198,+ to FFCP PHASE1:Hg19::chr12:122430186..122430198,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:122430186..122430198,+ | |||
|coexpression_cluster_id=C2193 | |||
|description=CAGE_peak_at_chr12:122430186..122430198,+ | |||
|id=chr12:122430186..122430198,+ | |||
|ontology_enrichment_celltype=CL:0002368!6.96e-21!13;CL:0002159!2.53e-18!13;CL:0002076!5.42e-14!43;CL:0002202!1.52e-13!9;CL:0002632!1.52e-13!9;CL:0000223!5.33e-10!59;CL:0000066!2.36e-09!254;CL:0000068!6.14e-09!3;CL:0000069!6.14e-09!3;CL:0000307!6.14e-09!3;CL:0000377!6.14e-09!3;CL:0002621!1.37e-08!3;CL:0002328!2.67e-08!3;CL:0000362!2.77e-08!8;CL:0002166!3.09e-08!3;CL:0000817!1.38e-07!3;CL:0002077!5.48e-07!33;CL:0000240!6.26e-07!6;CL:0000311!6.26e-07!6;CL:0000079!6.26e-07!6;CL:0000237!6.26e-07!6;CL:0000036!6.26e-07!6;CL:0000357!6.26e-07!6;CL:0000114!6.26e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000307;6.94e-38;3!CL:0000317;2.15e-26;2!CL:1000448;2.15e-26;2!CL:0002308;2.15e-26;2!CL:0002140;2.15e-26;2!CL:0000362;1.63e-22;9!CL:0002202;2.34e-22;9!CL:0002632;2.34e-22;9!CL:0002159;3.15e-22;14!CL:0002368;1.39e-15;13!CL:0000946;1.10e-13;1!CL:0000786;1.10e-13;1!CL:0000622;3.72e-11;5!CL:0000312;7.88e-11;5!CL:0000154;1.91e-09;6!CL:0000240;3.56e-09;6!CL:0000311;3.56e-09;6!CL:0000079;3.56e-09;6!CL:0000237;3.56e-09;6!CL:0002077;5.56e-09;34!CL:0000575;1.75e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,6.54e-38,3;CL:0000069,6.54e-38,3;CL:0000307,6.54e-38,3;CL:0000377,6.54e-38,3;CL:0000317,2.16e-26,2;CL:1000448,2.16e-26,2;CL:0002308,2.16e-26,2;CL:0002140,2.16e-26,2;CL:0000362,1.46e-22,9;CL:0002202,2.54e-22,9;CL:0002632,2.54e-22,9;CL:0002159,2.64e-22,14;CL:0002368,1.47e-15,13;CL:0000946,1.10e-13,1;CL:0000786,1.10e-13,1;CL:0000980,1.10e-13,1;CL:0000622,3.72e-11,5;CL:0000312,7.14e-11,5;CL:0002076,2.53e-10,42;CL:0000154,1.91e-09,6;CL:0000240,3.28e-09,6;CL:0000311,3.28e-09,6;CL:0000079,3.28e-09,6;CL:0000237,3.28e-09,6;CL:0000036,3.28e-09,6;CL:0000357,3.28e-09,6;CL:0000114,3.28e-09,6;CL:0002077,3.60e-09,34;CL:0000575,1.54e-07,2;CL:0000785,1.75e-07,2;CL:0000955,1.75e-07,2;CL:0000818,1.75e-07,2;CL:0000954,1.75e-07,2;CL:0000816,1.75e-07,2;CL:0000223,2.24e-07,58;CL:0000076,8.66e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000377;6.94e-38;3!CL:0000357;3.56e-09;6!CL:0000114;3.56e-09;6!CL:0000954;1.75e-07;2 | |||
|ontology_enrichment_disease=DOID:1749!8.01e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:0060058;7.26e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,8.12e-12,10 | |||
|ontology_enrichment_uberon=UBERON:0001949!1.37e-08!3;UBERON:0001004!2.44e-08!72;UBERON:0004815!2.67e-08!3;UBERON:0002031!2.67e-08!3;UBERON:0007196!3.00e-08!14;UBERON:0001558!3.00e-08!14;UBERON:0003729!4.72e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;2.15e-26;2!UBERON:0007771;2.15e-26;2!UBERON:0003297;2.15e-26;2!UBERON:0001821;2.15e-26;2!UBERON:0003487;2.15e-26;2!UBERON:0001820;2.15e-26;2!UBERON:0003126;1.19e-16;7!UBERON:0001005;1.19e-16;7!UBERON:0001003;1.22e-13;15!UBERON:0007376;1.22e-13;15!UBERON:0007196;1.51e-13;15!UBERON:0001558;1.51e-13;15!UBERON:0010371;4.49e-10;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,2.16e-26,2;UBERON:0007771,2.16e-26,2;UBERON:0003297,2.16e-26,2;UBERON:0001821,2.16e-26,2;UBERON:0003487,2.16e-26,2;UBERON:0001820,2.16e-26,2;UBERON:0005089,2.16e-26,2;UBERON:0005088,2.16e-26,2;UBERON:0003126,1.16e-16,7;UBERON:0001005,1.16e-16,7;UBERON:0001003,1.15e-13,15;UBERON:0007376,1.15e-13,15;UBERON:0007383,1.15e-13,15;UBERON:0007196,1.59e-13,15;UBERON:0001558,1.59e-13,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,1.10926203050036,0,1.42169232487422,0,0,0,0,0,0,0,0,0.755751887377619,0.242584061187816,0,0.411167888021826,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0.224723484445085,0.612167784741805,0.320929027076094,0,0,0,0,0,0,0,0,0,0.434377689410233,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,1.48313777113772,0.97364218096405,0.870648686496336,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,2.12586938479627,0.545492241181669,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53650399572076,1.1240175325762,0.502644862058154,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0.93733833986777,0.335964256397719,0.708875486211932,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87132768998086,3.25030123018261,0,0,0,0,0,0,0,0,0,0.165284915360978,0.384380134730212,0.255225424989168,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82822014178473,3.35151137767894,1.08890984861323,0,0,1.68471475667626,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0.455173793141999,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489961987071888,0.34823682632161,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248505071130865,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0.211200673038813,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33321511580659,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687034029507179,0,1.10057159113007,0.346576998451015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26757386311357,0,0,0,0.472775363535873,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,1.09935271517422,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.404112318087525,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,1.10926203050036,0,1.42169232487422,0,0,0,0,0,0,0,0,0.755751887377619,0.242584061187816,0,0.411167888021826,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0.224723484445085,0.612167784741805,0.320929027076094,0,0,0,0,0,0,0,0,0,0.434377689410233,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,1.48313777113772,0.97364218096405,0.870648686496336,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,2.12586938479627,0.545492241181669,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53650399572076,1.1240175325762,0.502644862058154,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0.93733833986777,0.335964256397719,0.708875486211932,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87132768998086,3.25030123018261,0,0,0,0,0,0,0,0,0,0.165284915360978,0.384380134730212,0.255225424989168,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82822014178473,3.35151137767894,1.08890984861323,0,0,1.68471475667626,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0.455173793141999,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489961987071888,0.34823682632161,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248505071130865,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0.211200673038813,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33321511580659,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687034029507179,0,1.10057159113007,0.346576998451015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26757386311357,0,0,0,0.472775363535873,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,1.09935271517422,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.404112318087525,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:122430186..122430198,+ | |||
}} | }} |
Latest revision as of 06:03, 24 July 2015
Short description: | p@chr12:122430186..122430198, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:122430186..122430198, + |
Coexpression cluster: | C2193_Burkitt_lymphoma_Sebocyte_Keratinocyte_Tracheal_Gingival_Bronchial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin gland | 2.16e-26 | 2 |
epidermis gland | 2.16e-26 | 2 |
gland of integumental system | 2.16e-26 | 2 |
sebaceous gland | 2.16e-26 | 2 |
skin sebaceous gland | 2.16e-26 | 2 |
sweat gland | 2.16e-26 | 2 |
sweat gland placode | 2.16e-26 | 2 |
sebaceous gland placode | 2.16e-26 | 2 |
trachea | 1.16e-16 | 7 |
respiratory airway | 1.16e-16 | 7 |
skin epidermis | 1.15e-13 | 15 |
outer epithelium | 1.15e-13 | 15 |
enveloping layer of ectoderm | 1.15e-13 | 15 |
tracheobronchial tree | 1.59e-13 | 15 |
lower respiratory tract | 1.59e-13 | 15 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 8.12e-12 | 10 |