FFCP PHASE1:Hg19::chr12:122462311..122462330,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:122462311..122462330,- | |||
|coexpression_cluster_id=C138 | |||
|description=CAGE_peak_at_chr12:122462311..122462330,- | |||
|id=chr12:122462311..122462330,- | |||
|ontology_enrichment_celltype=CL:0000945!2.46e-23!24;CL:0000826!2.46e-23!24;CL:0000817!5.01e-22!3;CL:0000236!3.50e-18!14;CL:0000785!1.67e-15!2;CL:0000955!1.67e-15!2;CL:0000818!1.67e-15!2;CL:0000954!1.67e-15!2;CL:0000816!1.67e-15!2;CL:0000542!3.77e-12!53;CL:0000051!3.77e-12!53;CL:0000838!5.15e-10!52;CL:0000819!5.59e-09!1;CL:0000313!8.15e-09!1;CL:0000946!3.06e-08!1;CL:0000786!3.06e-08!1;CL:0000980!3.06e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.08e-34;24!CL:0000785;1.84e-34;1!CL:0000819;1.84e-34;1!CL:0000313;8.34e-34;1!CL:0000159;1.17e-17;2!CL:0000542;1.15e-11;53!CL:0000236;3.13e-11;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.05e-34,24;CL:0000826,1.05e-34,24;CL:0000819,1.84e-34,1;CL:0000313,9.85e-34,1;CL:0000785,5.48e-18,2;CL:0000955,5.48e-18,2;CL:0000818,5.48e-18,2;CL:0000954,5.48e-18,2;CL:0000816,5.48e-18,2;CL:0000159,1.27e-17,2;CL:0000838,2.36e-16,52;CL:0000542,4.70e-16,53;CL:0000051,4.70e-16,53;CL:0000817,1.85e-12,3;CL:0000236,1.64e-10,14;CL:0002087,1.44e-07,115;CL:0002031,2.87e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000954;5.48e-18;2!CL:0000051;1.15e-11;53 | |||
|ontology_enrichment_disease=DOID:0060058!2.76e-12!10;DOID:0060073!5.59e-09!1;DOID:8675!5.59e-09!1;DOID:2152!8.15e-09!1;DOID:12603!9.46e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:0060058;5.27e-53;10!DOID:0060073;1.84e-34;1!DOID:8675;1.84e-34;1!DOID:2152;8.34e-34;1!DOID:2531;3.61e-07;51!DOID:0060083;3.61e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.27e-53,10;DOID:0060073,1.84e-34,1;DOID:8675,1.84e-34,1;DOID:2152,9.85e-34,1;DOID:2531,5.89e-11,51;DOID:0060083,5.89e-11,51 | |||
|ontology_enrichment_uberon=UBERON:0002113!5.59e-09!27;UBERON:0003918!5.59e-09!27;UBERON:0005095!5.59e-09!27;UBERON:0007687!5.59e-09!27;UBERON:0004911!8.15e-09!1;UBERON:0002372!1.10e-08!1;UBERON:0001961!1.10e-08!1;UBERON:0001744!1.10e-08!1;UBERON:0001735!1.10e-08!1;UBERON:0001154!1.84e-08!1;UBERON:0001153!1.84e-08!1;UBERON:0001301!2.64e-08!1;UBERON:0000489!1.70e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;8.34e-34;1!UBERON:0004909;1.17e-17;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,9.85e-34,1;UBERON:0004909,1.27e-17,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02829443017569,2.13253848731132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0,0,2.86216126360609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0.557409525377156,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.85255861764596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70509637733254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,1.34226518157351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.5388164241167,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:122462311..122462330,- | |||
}} |
Latest revision as of 06:03, 24 July 2015
Short description: | p@chr12:122462311..122462330, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:122462311..122462330, - |
Coexpression cluster: | C138_diffuse_Burkitt_lymphangiectasia_lymphoma_acute_CD19_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.05e-34 | 24 |
pro-B cell | 1.05e-34 | 24 |
B-1 B cell | 1.84e-34 | 1 |
serous secreting cell | 9.85e-34 | 1 |
mature B cell | 5.48e-18 | 2 |
pre-B-II cell | 5.48e-18 | 2 |
transitional stage B cell | 5.48e-18 | 2 |
small pre-B-II cell | 5.48e-18 | 2 |
immature B cell | 5.48e-18 | 2 |
seromucus secreting cell | 1.27e-17 | 2 |
lymphoid lineage restricted progenitor cell | 2.36e-16 | 52 |
lymphocyte | 4.70e-16 | 53 |
common lymphoid progenitor | 4.70e-16 | 53 |
precursor B cell | 1.85e-12 | 3 |
B cell | 1.64e-10 | 14 |
nongranular leukocyte | 1.44e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 2.87e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 9.85e-34 | 1 |
epithelium of gonad | 1.27e-17 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.27e-53 | 10 |
lymphatic system cancer | 1.84e-34 | 1 |
lymphosarcoma | 1.84e-34 | 1 |
ovary epithelial cancer | 9.85e-34 | 1 |
hematologic cancer | 5.89e-11 | 51 |
immune system cancer | 5.89e-11 | 51 |