FFCP PHASE1:Hg19::chr12:122501293..122501337,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=38bp_to_ENST00000540968_5end | |association_with_transcript=38bp_to_ENST00000540968_5end | ||
|cluster_id=chr12:122501293..122501337,+ | |||
|description=CAGE_peak_1_at_ENST00000540968_5end | |description=CAGE_peak_1_at_ENST00000540968_5end | ||
|id=chr12:122501293..122501337,+ | |id=chr12:122501293..122501337,+ | ||
|ontology_enrichment_celltype=CL:0000222!6.79e-21!119;CL:0000055!1.69e-13!180;CL:0000192!4.65e-12!42;CL:0000514!4.65e-12!42;CL:0000183!1.28e-11!59;CL:0000213!1.50e-11!57;CL:0000215!1.50e-11!57;CL:0000359!1.01e-10!32;CL:0000680!1.63e-10!57;CL:0000056!1.63e-10!57;CL:0000355!1.63e-10!57;CL:0000187!1.33e-09!54;CL:0000115!1.86e-08!35;CL:0000393!1.09e-07!60;CL:0000211!1.09e-07!60;CL:0000057!1.33e-07!75;CL:0002139!1.82e-07!24;CL:0002078!9.77e-07!44 | |ontology_enrichment_celltype=CL:0000222!6.79e-21!119;CL:0000055!1.69e-13!180;CL:0000192!4.65e-12!42;CL:0000514!4.65e-12!42;CL:0000183!1.28e-11!59;CL:0000213!1.50e-11!57;CL:0000215!1.50e-11!57;CL:0000359!1.01e-10!32;CL:0000680!1.63e-10!57;CL:0000056!1.63e-10!57;CL:0000355!1.63e-10!57;CL:0000187!1.33e-09!54;CL:0000115!1.86e-08!35;CL:0000393!1.09e-07!60;CL:0000211!1.09e-07!60;CL:0000057!1.33e-07!75;CL:0002139!1.82e-07!24;CL:0002078!9.77e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.90e-13;32!CL:0000192;4.06e-09;43!CL:0000115;1.13e-08;36!CL:0002139;2.08e-07;24!CL:0000213;2.90e-07;58!CL:0000215;2.90e-07;58!CL:0000071;6.62e-07;18 | |ontology_enrichment_celltype_v019=CL:0000359;2.90e-13;32!CL:0000192;4.06e-09;43!CL:0000115;1.13e-08;36!CL:0002139;2.08e-07;24!CL:0000213;2.90e-07;58!CL:0000215;2.90e-07;58!CL:0000071;6.62e-07;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.50e-22,121;CL:0000359,1.03e-14,32;CL:0000192,3.85e-14,43;CL:0000514,3.85e-14,43;CL:0000213,1.21e-12,58;CL:0000215,1.21e-12,58;CL:0000680,4.93e-11,58;CL:0000056,4.93e-11,58;CL:0000355,4.93e-11,58;CL:0000187,7.38e-10,55;CL:0000115,1.43e-09,36;CL:0000048,1.65e-08,427;CL:0000723,7.08e-08,433;CL:0000393,7.62e-08,61;CL:0000211,7.62e-08,61;CL:0002139,1.21e-07,24;CL:0000071,3.69e-07,18;CL:0002546,3.69e-07,18;CL:0000034,4.41e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;4.06e-09;43!CL:0000222;5.73e-07;121!CL:0002546;6.62e-07;18 | |ontology_enrichment_development_v019=CL:0000514;4.06e-09;43!CL:0000222;5.73e-07;121!CL:0002546;6.62e-07;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;1.12e-08;14 | |ontology_enrichment_disease_v019=DOID:2394;1.12e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,5.79e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000055!9.19e-19!69;UBERON:0002049!2.38e-18!79;UBERON:0007798!2.38e-18!79;UBERON:0001981!2.16e-17!60;UBERON:0007500!2.16e-17!60;UBERON:0004537!2.16e-17!60;UBERON:0006965!2.16e-17!60;UBERON:0004872!9.03e-17!84;UBERON:0003914!1.20e-14!118;UBERON:0001637!8.01e-14!42;UBERON:0003509!8.01e-14!42;UBERON:0004572!8.01e-14!42;UBERON:0004573!1.67e-11!33;UBERON:0004571!1.67e-11!33;UBERON:0004535!1.77e-11!110;UBERON:0001009!7.45e-11!113;UBERON:0000490!3.47e-10!138;UBERON:0002385!1.03e-09!63;UBERON:0001015!1.03e-09!63;UBERON:0000383!1.03e-09!63;UBERON:0001134!1.59e-09!61;UBERON:0002036!1.59e-09!61;UBERON:0003082!1.59e-09!61;UBERON:0004111!4.73e-09!241;UBERON:0000025!2.13e-08!194;UBERON:0004290!3.20e-08!70;UBERON:0000947!3.66e-08!21;UBERON:0010191!3.66e-08!21;UBERON:0000477!3.73e-08!286;UBERON:0005256!3.95e-07!143;UBERON:0000914!4.49e-07!83;UBERON:0002329!4.49e-07!83;UBERON:0003077!4.49e-07!83;UBERON:0003059!4.49e-07!83;UBERON:0007282!4.49e-07!83;UBERON:0009618!4.49e-07!83;UBERON:0007285!4.49e-07!83 | |ontology_enrichment_uberon=UBERON:0000055!9.19e-19!69;UBERON:0002049!2.38e-18!79;UBERON:0007798!2.38e-18!79;UBERON:0001981!2.16e-17!60;UBERON:0007500!2.16e-17!60;UBERON:0004537!2.16e-17!60;UBERON:0006965!2.16e-17!60;UBERON:0004872!9.03e-17!84;UBERON:0003914!1.20e-14!118;UBERON:0001637!8.01e-14!42;UBERON:0003509!8.01e-14!42;UBERON:0004572!8.01e-14!42;UBERON:0004573!1.67e-11!33;UBERON:0004571!1.67e-11!33;UBERON:0004535!1.77e-11!110;UBERON:0001009!7.45e-11!113;UBERON:0000490!3.47e-10!138;UBERON:0002385!1.03e-09!63;UBERON:0001015!1.03e-09!63;UBERON:0000383!1.03e-09!63;UBERON:0001134!1.59e-09!61;UBERON:0002036!1.59e-09!61;UBERON:0003082!1.59e-09!61;UBERON:0004111!4.73e-09!241;UBERON:0000025!2.13e-08!194;UBERON:0004290!3.20e-08!70;UBERON:0000947!3.66e-08!21;UBERON:0010191!3.66e-08!21;UBERON:0000477!3.73e-08!286;UBERON:0005256!3.95e-07!143;UBERON:0000914!4.49e-07!83;UBERON:0002329!4.49e-07!83;UBERON:0003077!4.49e-07!83;UBERON:0003059!4.49e-07!83;UBERON:0007282!4.49e-07!83;UBERON:0009618!4.49e-07!83;UBERON:0007285!4.49e-07!83 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.85e-14;33!UBERON:0004571;5.85e-14;33!UBERON:0007500;7.72e-13;56!UBERON:0001981;7.72e-13;56!UBERON:0004537;7.72e-13;56!UBERON:0000055;1.60e-12;65!UBERON:0001637;9.87e-12;42!UBERON:0003509;9.87e-12;42!UBERON:0004572;9.87e-12;42!UBERON:0000947;6.03e-11;21!UBERON:0010191;6.03e-11;21!UBERON:0003914;1.84e-10;74!UBERON:0002049;9.02e-09;75!UBERON:0007798;9.02e-09;75!UBERON:0000025;3.48e-07;93!UBERON:0004638;6.62e-07;18!UBERON:0001986;6.62e-07;18!UBERON:0004852;6.62e-07;18 | |ontology_enrichment_uberon_v019=UBERON:0004573;5.85e-14;33!UBERON:0004571;5.85e-14;33!UBERON:0007500;7.72e-13;56!UBERON:0001981;7.72e-13;56!UBERON:0004537;7.72e-13;56!UBERON:0000055;1.60e-12;65!UBERON:0001637;9.87e-12;42!UBERON:0003509;9.87e-12;42!UBERON:0004572;9.87e-12;42!UBERON:0000947;6.03e-11;21!UBERON:0010191;6.03e-11;21!UBERON:0003914;1.84e-10;74!UBERON:0002049;9.02e-09;75!UBERON:0007798;9.02e-09;75!UBERON:0000025;3.48e-07;93!UBERON:0004638;6.62e-07;18!UBERON:0001986;6.62e-07;18!UBERON:0004852;6.62e-07;18 | ||
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| ||
|short_description=p1@ENST00000540968 | |short_description=p1@ENST00000540968 | ||
}} | }} |
Latest revision as of 06:04, 24 July 2015
Short description: | p1@ENST00000540968 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000540968_5end |
Coexpression cluster: | NA |
Association with transcript: | 38bp_to_ENST00000540968_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.50e-22 | 121 |
vascular associated smooth muscle cell | 1.03e-14 | 32 |
smooth muscle cell | 3.85e-14 | 43 |
smooth muscle myoblast | 3.85e-14 | 43 |
lining cell | 1.21e-12 | 58 |
barrier cell | 1.21e-12 | 58 |
muscle precursor cell | 4.93e-11 | 58 |
myoblast | 4.93e-11 | 58 |
multi-potent skeletal muscle stem cell | 4.93e-11 | 58 |
muscle cell | 7.38e-10 | 55 |
endothelial cell | 1.43e-09 | 36 |
multi fate stem cell | 1.65e-08 | 427 |
somatic stem cell | 7.08e-08 | 433 |
electrically responsive cell | 7.62e-08 | 61 |
electrically active cell | 7.62e-08 | 61 |
endothelial cell of vascular tree | 1.21e-07 | 24 |
blood vessel endothelial cell | 3.69e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.69e-07 | 18 |
stem cell | 4.41e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.79e-09 | 14 |