FFCP PHASE1:Hg19::chr12:1613287..1613292,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:1613287..1613292,+ | |||
|coexpression_cluster_id=C1666 | |coexpression_cluster_id=C1666 | ||
|description=CAGE_peak_at_chr12:1613287..1613292,+ | |description=CAGE_peak_at_chr12:1613287..1613292,+ | ||
|id=chr12:1613287..1613292,+ | |id=chr12:1613287..1613292,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000319;3.10e-12;1!CL:0002553;6.61e-12;1!CL:0000182;1.82e-08;12!CL:0000159;9.69e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,3.27e-12,1;CL:0002553,6.26e-12,1;CL:0000182,1.82e-08,12;CL:0000159,9.96e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0001041;9.65e-17;30!UBERON:0009497;2.54e-13;13!UBERON:0004161;3.43e-09;11 | |||
|ontology_enrichment_disease=DOID:14566!7.57e-19!239;DOID:0050687!9.36e-19!143;DOID:162!3.32e-18!235;DOID:305!1.62e-10!106;DOID:1324!5.66e-09!15;DOID:0050615!2.96e-08!16;DOID:1115!5.14e-07!20 | |ontology_enrichment_disease=DOID:14566!7.57e-19!239;DOID:0050687!9.36e-19!143;DOID:162!3.32e-18!235;DOID:305!1.62e-10!106;DOID:1324!5.66e-09!15;DOID:0050615!2.96e-08!16;DOID:1115!5.14e-07!20 | ||
|ontology_enrichment_disease_v019=DOID:3030;3.10e-12;1!DOID:5662;6.61e-12;1!DOID:1324;5.41e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,3.27e-12,1;DOID:5662,5.62e-12,1;DOID:0050687,1.58e-10,143;DOID:162,4.35e-09,235;DOID:14566,7.54e-09,239;DOID:305,1.26e-08,106;DOID:1324,5.30e-07,15 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002423;5.16e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008835,5.97e-08,22;UBERON:0003894,5.97e-08,22;UBERON:0009854,1.30e-07,23;UBERON:0007499,5.16e-07,25;UBERON:0009497,5.16e-07,25;UBERON:0000015,5.16e-07,25;UBERON:0002423,5.16e-07,25;UBERON:0006235,5.16e-07,25;UBERON:0004161,5.16e-07,25;UBERON:0009856,9.50e-07,26 | |||
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| ||
|short_description=p@chr12:1613287..1613292,+ | |short_description=p@chr12:1613287..1613292,+ | ||
}} | }} |
Latest revision as of 07:13, 24 July 2015
Short description: | p@chr12:1613287..1613292, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:1613287..1613292, + |
Coexpression cluster: | C1666_large_bile_hepatoma_mucinous_giant_glioblastoma_Keratocytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 3.27e-12 | 1 |
lung fibroblast | 6.26e-12 | 1 |
hepatocyte | 1.82e-08 | 12 |
seromucus secreting cell | 9.96e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
hepatic diverticulum | 5.97e-08 | 22 |
liver primordium | 5.97e-08 | 22 |
digestive tract diverticulum | 1.30e-07 | 23 |
epithelial sac | 5.16e-07 | 25 |
epithelium of foregut-midgut junction | 5.16e-07 | 25 |
anatomical boundary | 5.16e-07 | 25 |
hepatobiliary system | 5.16e-07 | 25 |
foregut-midgut junction | 5.16e-07 | 25 |
septum transversum | 5.16e-07 | 25 |
sac | 9.50e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 3.27e-12 | 1 |
pleomorphic carcinoma | 5.62e-12 | 1 |
cell type cancer | 1.58e-10 | 143 |
cancer | 4.35e-09 | 235 |
disease of cellular proliferation | 7.54e-09 | 239 |
carcinoma | 1.26e-08 | 106 |
lung cancer | 5.30e-07 | 15 |