FFCP PHASE1:Hg19::chr12:1919552..1919568,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:1919552..1919568,+ | |||
|coexpression_cluster_id=C526 | |coexpression_cluster_id=C526 | ||
|description=CAGE_peak_at_chr12:1919552..1919568,+ | |description=CAGE_peak_at_chr12:1919552..1919568,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002057!2.19e-39!42;CL:0000860!2.72e-36!45;CL:0002194!1.80e-23!63;CL:0000576!1.80e-23!63;CL:0000040!1.80e-23!63;CL:0000559!1.80e-23!63;CL:0002009!1.48e-22!65;CL:0000839!2.29e-22!70;CL:0000557!5.86e-22!71;CL:0000763!5.94e-21!112;CL:0000049!5.94e-21!112;CL:0000766!4.43e-20!76;CL:0000037!1.24e-12!172;CL:0000566!1.24e-12!172;CL:0002032!1.39e-12!165;CL:0000837!1.39e-12!165;CL:0000988!2.16e-12!182;CL:0002087!1.52e-11!119;CL:0002031!7.32e-11!124;CL:0000738!1.00e-09!140;CL:0000134!6.60e-08!358;CL:0002320!1.50e-07!365;CL:0000219!7.28e-07!390 | |ontology_enrichment_celltype=CL:0002057!2.19e-39!42;CL:0000860!2.72e-36!45;CL:0002194!1.80e-23!63;CL:0000576!1.80e-23!63;CL:0000040!1.80e-23!63;CL:0000559!1.80e-23!63;CL:0002009!1.48e-22!65;CL:0000839!2.29e-22!70;CL:0000557!5.86e-22!71;CL:0000763!5.94e-21!112;CL:0000049!5.94e-21!112;CL:0000766!4.43e-20!76;CL:0000037!1.24e-12!172;CL:0000566!1.24e-12!172;CL:0002032!1.39e-12!165;CL:0000837!1.39e-12!165;CL:0000988!2.16e-12!182;CL:0002087!1.52e-11!119;CL:0002031!7.32e-11!124;CL:0000738!1.00e-09!140;CL:0000134!6.60e-08!358;CL:0002320!1.50e-07!365;CL:0000219!7.28e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0002379;4.72e-17;1!CL:0000860;4.69e-07;33!CL:0002057;4.69e-07;33 | |ontology_enrichment_celltype_v019=CL:0002379;4.72e-17;1!CL:0000860;4.69e-07;33!CL:0002057;4.69e-07;33 | ||
|ontology_enrichment_celltype_v019_2=CL:0002379,4.72e-17,1 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3620;4.72e-17;1!DOID:3565;4.72e-17;1!DOID:4929;6.17e-09;2!DOID:3493;6.17e-09;2 | |ontology_enrichment_disease_v019=DOID:3620;4.72e-17;1!DOID:3565;4.72e-17;1!DOID:4929;6.17e-09;2!DOID:3493;6.17e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3620,4.72e-17,1;DOID:3565,4.72e-17,1;DOID:4929,4.34e-09,2;DOID:3493,8.09e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002371!9.56e-19!80;UBERON:0001474!5.58e-17!86;UBERON:0002390!8.61e-16!102;UBERON:0003061!8.61e-16!102;UBERON:0002405!9.10e-16!115;UBERON:0002193!4.46e-15!112;UBERON:0004765!1.71e-13!101;UBERON:0001434!1.71e-13!101;UBERON:0002384!3.35e-08!375;UBERON:0002204!8.32e-08!167;UBERON:0003081!8.50e-07!216 | |ontology_enrichment_uberon=UBERON:0002371!9.56e-19!80;UBERON:0001474!5.58e-17!86;UBERON:0002390!8.61e-16!102;UBERON:0003061!8.61e-16!102;UBERON:0002405!9.10e-16!115;UBERON:0002193!4.46e-15!112;UBERON:0004765!1.71e-13!101;UBERON:0001434!1.71e-13!101;UBERON:0002384!3.35e-08!375;UBERON:0002204!8.32e-08!167;UBERON:0003081!8.50e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0004913;1.53e-16;1!UBERON:0003703;1.53e-16;1!UBERON:0001174;1.53e-16;1!UBERON:0004914;1.53e-16;1!UBERON:0000945;3.88e-13;5!UBERON:0010039;3.88e-13;5 | |ontology_enrichment_uberon_v019=UBERON:0004913;1.53e-16;1!UBERON:0003703;1.53e-16;1!UBERON:0001174;1.53e-16;1!UBERON:0004914;1.53e-16;1!UBERON:0000945;3.88e-13;5!UBERON:0010039;3.88e-13;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,7.57e-17,1;UBERON:0003703,7.57e-17,1;UBERON:0001174,7.57e-17,1;UBERON:0004914,7.57e-17,1;UBERON:0000945,1.71e-08,8;UBERON:0010039,1.71e-08,8 | |||
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| ||
|short_description=p@chr12:1919552..1919568,+ | |short_description=p@chr12:1919552..1919568,+ | ||
}} | }} |
Latest revision as of 07:21, 24 July 2015
Short description: | p@chr12:1919552..1919568, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:1919552..1919568, + |
Coexpression cluster: | C526_meningioma_bile_cervical_fibrosarcoma_prostate_epidermoid_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 4.72e-17 | 1 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 7.57e-17 | 1 |
extrahepatic bile duct | 7.57e-17 | 1 |
common bile duct | 7.57e-17 | 1 |
duodenal papilla | 7.57e-17 | 1 |
stomach | 1.71e-08 | 8 |
food storage organ | 1.71e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 4.72e-17 | 1 |
meningioma | 4.72e-17 | 1 |
tubular adenocarcinoma | 4.34e-09 | 2 |
signet ring cell adenocarcinoma | 8.09e-09 | 2 |