FFCP PHASE1:Hg19::chr12:1919552..1919568,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:1919552..1919568,+ | |||
|coexpression_cluster_id=C526 | |||
|description=CAGE_peak_at_chr12:1919552..1919568,+ | |description=CAGE_peak_at_chr12:1919552..1919568,+ | ||
|id=chr12:1919552..1919568,+ | |id=chr12:1919552..1919568,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.19e-39!42;CL:0000860!2.72e-36!45;CL:0002194!1.80e-23!63;CL:0000576!1.80e-23!63;CL:0000040!1.80e-23!63;CL:0000559!1.80e-23!63;CL:0002009!1.48e-22!65;CL:0000839!2.29e-22!70;CL:0000557!5.86e-22!71;CL:0000763!5.94e-21!112;CL:0000049!5.94e-21!112;CL:0000766!4.43e-20!76;CL:0000037!1.24e-12!172;CL:0000566!1.24e-12!172;CL:0002032!1.39e-12!165;CL:0000837!1.39e-12!165;CL:0000988!2.16e-12!182;CL:0002087!1.52e-11!119;CL:0002031!7.32e-11!124;CL:0000738!1.00e-09!140;CL:0000134!6.60e-08!358;CL:0002320!1.50e-07!365;CL:0000219!7.28e-07!390 | |ontology_enrichment_celltype=CL:0002057!2.19e-39!42;CL:0000860!2.72e-36!45;CL:0002194!1.80e-23!63;CL:0000576!1.80e-23!63;CL:0000040!1.80e-23!63;CL:0000559!1.80e-23!63;CL:0002009!1.48e-22!65;CL:0000839!2.29e-22!70;CL:0000557!5.86e-22!71;CL:0000763!5.94e-21!112;CL:0000049!5.94e-21!112;CL:0000766!4.43e-20!76;CL:0000037!1.24e-12!172;CL:0000566!1.24e-12!172;CL:0002032!1.39e-12!165;CL:0000837!1.39e-12!165;CL:0000988!2.16e-12!182;CL:0002087!1.52e-11!119;CL:0002031!7.32e-11!124;CL:0000738!1.00e-09!140;CL:0000134!6.60e-08!358;CL:0002320!1.50e-07!365;CL:0000219!7.28e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0002379;4.72e-17;1!CL:0000860;4.69e-07;33!CL:0002057;4.69e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,4.72e-17,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;4.72e-17;1!DOID:3565;4.72e-17;1!DOID:4929;6.17e-09;2!DOID:3493;6.17e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,4.72e-17,1;DOID:3565,4.72e-17,1;DOID:4929,4.34e-09,2;DOID:3493,8.09e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002371!9.56e-19!80;UBERON:0001474!5.58e-17!86;UBERON:0002390!8.61e-16!102;UBERON:0003061!8.61e-16!102;UBERON:0002405!9.10e-16!115;UBERON:0002193!4.46e-15!112;UBERON:0004765!1.71e-13!101;UBERON:0001434!1.71e-13!101;UBERON:0002384!3.35e-08!375;UBERON:0002204!8.32e-08!167;UBERON:0003081!8.50e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;1.53e-16;1!UBERON:0003703;1.53e-16;1!UBERON:0001174;1.53e-16;1!UBERON:0004914;1.53e-16;1!UBERON:0000945;3.88e-13;5!UBERON:0010039;3.88e-13;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,7.57e-17,1;UBERON:0003703,7.57e-17,1;UBERON:0001174,7.57e-17,1;UBERON:0004914,7.57e-17,1;UBERON:0000945,1.71e-08,8;UBERON:0010039,1.71e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0.581592955118259,0.377875943688809,0.242584061187816,0.697287110717054,0.411167888021826,0.309706370895104,0.28769239232215,0,0.47296445977717,0.689491361473237,0.645484683583826,0,0.752969358170419,0.545812300115692,1.12361742222542,0.612167784741805,0.962787081228281,1.91801137739712,0,0,0,0.290209238628584,1.13477044938228,0,0,0,0,0,1.47311054395026,0.316462387440884,0,0,0.209658645508376,0.336985893439485,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0.481764225311099,0.80719882876419,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824019371133798,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66866435871542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50746117111426,0,0,0,0,0,0,0,0,0,0,1.61528296235062,0,0,0,0,0.866851769704557,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0.157566364614447,0,0.202210631562555,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,7.60322422939727,0,0,0,0,0,0,0,0,0,0.164185041498678,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.7038731985702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,1.92212912082159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07965256976767,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,1.05868461514708,0,1.46067277649303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186224142887574,0.112131862580613,0,0.202117188958219,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0.581592955118259,0.377875943688809,0.242584061187816,0.697287110717054,0.411167888021826,0.309706370895104,0.28769239232215,0,0.47296445977717,0.689491361473237,0.645484683583826,0,0.752969358170419,0.545812300115692,1.12361742222542,0.612167784741805,0.962787081228281,1.91801137739712,0,0,0,0.290209238628584,1.13477044938228,0,0,0,0,0,1.47311054395026,0.316462387440884,0,0,0.209658645508376,0.336985893439485,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0.481764225311099,0.80719882876419,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824019371133798,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66866435871542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50746117111426,0,0,0,0,0,0,0,0,0,0,1.61528296235062,0,0,0,0,0.866851769704557,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0.157566364614447,0,0.202210631562555,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,7.60322422939727,0,0,0,0,0,0,0,0,0,0.164185041498678,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.7038731985702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,1.92212912082159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07965256976767,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,1.05868461514708,0,1.46067277649303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186224142887574,0.112131862580613,0,0.202117188958219,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr12:1919552..1919568,+ | |short_description=p@chr12:1919552..1919568,+ | ||
}} | }} |
Latest revision as of 07:21, 24 July 2015
Short description: | p@chr12:1919552..1919568, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:1919552..1919568, + |
Coexpression cluster: | C526_meningioma_bile_cervical_fibrosarcoma_prostate_epidermoid_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 4.72e-17 | 1 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 7.57e-17 | 1 |
extrahepatic bile duct | 7.57e-17 | 1 |
common bile duct | 7.57e-17 | 1 |
duodenal papilla | 7.57e-17 | 1 |
stomach | 1.71e-08 | 8 |
food storage organ | 1.71e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 4.72e-17 | 1 |
meningioma | 4.72e-17 | 1 |
tubular adenocarcinoma | 4.34e-09 | 2 |
signet ring cell adenocarcinoma | 8.09e-09 | 2 |