FFCP PHASE1:Hg19::chr12:20523184..20523195,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000535755_5end | |association_with_transcript=0bp_to_ENST00000535755_5end | ||
|cluster_id=chr12:20523184..20523195,- | |||
|coexpression_cluster_id=C2200 | |coexpression_cluster_id=C2200 | ||
|description=CAGE_peak_1_at_ENST00000535755_5end | |description=CAGE_peak_1_at_ENST00000535755_5end | ||
|id=chr12:20523184..20523195,- | |id=chr12:20523184..20523195,- | ||
|ontology_enrichment_celltype=CL:0002150!3.89e-12!3;CL:0000861!3.89e-12!3 | |ontology_enrichment_celltype=CL:0002150!3.89e-12!3;CL:0000861!3.89e-12!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010226;1.69e-21;1!UBERON:0010227;4.66e-21;1 | |||
|ontology_enrichment_disease=DOID:114!8.90e-09!2 | |ontology_enrichment_disease=DOID:114!8.90e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:114;1.92e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.02e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.68e-32!9;UBERON:0001557!2.39e-14!19;UBERON:0004151!2.79e-12!3;UBERON:0007100!9.29e-12!27;UBERON:0003978!1.20e-11!3;UBERON:0009751!1.20e-11!3;UBERON:0000946!1.20e-11!3;UBERON:0002523!1.20e-11!3;UBERON:0005983!1.20e-11!3;UBERON:0002165!1.20e-11!3;UBERON:0002062!1.20e-11!3;UBERON:0007280!1.20e-11!3;UBERON:0007023!1.93e-10!115;UBERON:0002081!1.24e-08!2;UBERON:0002133!3.84e-08!2;UBERON:0000062!4.69e-08!511;UBERON:0001048!7.27e-08!168 | |ontology_enrichment_uberon=UBERON:0001737!2.68e-32!9;UBERON:0001557!2.39e-14!19;UBERON:0004151!2.79e-12!3;UBERON:0007100!9.29e-12!27;UBERON:0003978!1.20e-11!3;UBERON:0009751!1.20e-11!3;UBERON:0000946!1.20e-11!3;UBERON:0002523!1.20e-11!3;UBERON:0005983!1.20e-11!3;UBERON:0002165!1.20e-11!3;UBERON:0002062!1.20e-11!3;UBERON:0007280!1.20e-11!3;UBERON:0007023!1.93e-10!115;UBERON:0002081!1.24e-08!2;UBERON:0002133!3.84e-08!2;UBERON:0000062!4.69e-08!511;UBERON:0001048!7.27e-08!168 | ||
|ontology_enrichment_uberon_v019=UBERON:0004151;1.59e-27;3!UBERON:0002084;1.69e-21;1!UBERON:0002082;1.69e-21;1!UBERON:0002079;4.66e-21;1!UBERON:0002146;4.66e-21;1!UBERON:0005623;4.66e-21;1!UBERON:0007100;3.66e-13;25!UBERON:0002081;3.18e-11;2!UBERON:0001737;9.23e-10;9!UBERON:0001557;9.23e-10;9!UBERON:0000948;8.58e-09;22!UBERON:0003978;6.56e-08;3!UBERON:0000946;6.56e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.22e-27,3;UBERON:0002084,1.53e-21,1;UBERON:0002082,1.53e-21,1;UBERON:0010226,1.53e-21,1;UBERON:0002079,3.45e-21,1;UBERON:0002146,9.43e-21,1;UBERON:0005623,9.43e-21,1;UBERON:0007100,3.43e-12,27;UBERON:0002081,2.73e-11,2;UBERON:0010227,2.73e-11,2;UBERON:0001737,1.01e-09,9;UBERON:0000948,4.31e-08,24;UBERON:0005498,4.31e-08,24;UBERON:0004140,4.31e-08,24;UBERON:0009881,4.31e-08,24;UBERON:0004141,4.31e-08,24;UBERON:0003084,4.31e-08,24;UBERON:0007005,4.31e-08,24;UBERON:0004139,4.31e-08,24;UBERON:0004291,4.31e-08,24;UBERON:0003978,8.29e-08,3;UBERON:0009751,8.29e-08,3;UBERON:0000946,8.29e-08,3;UBERON:0002523,8.29e-08,3;UBERON:0005983,8.29e-08,3;UBERON:0002165,8.29e-08,3;UBERON:0002062,8.29e-08,3;UBERON:0007280,8.29e-08,3 | |||
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| ||
|short_description=p1@ENST00000535755 | |short_description=p1@ENST00000535755 | ||
}} | }} |
Latest revision as of 07:26, 24 July 2015
Short description: | p1@ENST00000535755 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000535755_5end |
Coexpression cluster: | C2200_left_heart_epitheloid_Hep2_cervical_small_large |
Association with transcript: | 0bp_to_ENST00000535755_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 1.22e-27 | 3 |
heart left ventricle | 1.53e-21 | 1 |
cardiac ventricle | 1.53e-21 | 1 |
future cardiac ventricle | 1.53e-21 | 1 |
left cardiac atrium | 3.45e-21 | 1 |
pulmonary valve | 9.43e-21 | 1 |
semi-lunar valve | 9.43e-21 | 1 |
primary circulatory organ | 3.43e-12 | 27 |
cardiac atrium | 2.73e-11 | 2 |
future cardiac atrium | 2.73e-11 | 2 |
larynx | 1.01e-09 | 9 |
heart | 4.31e-08 | 24 |
primitive heart tube | 4.31e-08 | 24 |
primary heart field | 4.31e-08 | 24 |
anterior lateral plate mesoderm | 4.31e-08 | 24 |
heart tube | 4.31e-08 | 24 |
heart primordium | 4.31e-08 | 24 |
cardiac mesoderm | 4.31e-08 | 24 |
cardiogenic plate | 4.31e-08 | 24 |
heart rudiment | 4.31e-08 | 24 |
valve | 8.29e-08 | 3 |
cardiac mesenchyme | 8.29e-08 | 3 |
cardial valve | 8.29e-08 | 3 |
tunica intima | 8.29e-08 | 3 |
heart layer | 8.29e-08 | 3 |
endocardium | 8.29e-08 | 3 |
endocardial cushion | 8.29e-08 | 3 |
presumptive endocardium | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.02e-11 | 2 |