FFCP PHASE1:Hg19::chr12:2800993..2801018,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:2800993..2801018,- | |||
|coexpression_cluster_id=C3275 | |||
|description=CAGE_peak_at_chr12:2800993..2801018,- | |description=CAGE_peak_at_chr12:2800993..2801018,- | ||
|id=chr12:2800993..2801018,- | |id=chr12:2800993..2801018,- | ||
|ontology_enrichment_celltype=CL:0000542!3.31e-17!53;CL:0000051!3.31e-17!53;CL:0000791!6.12e-17!18;CL:0000789!6.12e-17!18;CL:0002420!6.12e-17!18;CL:0002419!6.12e-17!18;CL:0000790!6.12e-17!18;CL:0000838!1.00e-16!52;CL:0000084!2.22e-14!25;CL:0000827!2.22e-14!25;CL:0000625!2.43e-11!11;CL:0000988!6.92e-09!182;CL:0000037!3.18e-08!172;CL:0000566!3.18e-08!172;CL:0002032!7.51e-07!165;CL:0000837!7.51e-07!165 | |ontology_enrichment_celltype=CL:0000542!3.31e-17!53;CL:0000051!3.31e-17!53;CL:0000791!6.12e-17!18;CL:0000789!6.12e-17!18;CL:0002420!6.12e-17!18;CL:0002419!6.12e-17!18;CL:0000790!6.12e-17!18;CL:0000838!1.00e-16!52;CL:0000084!2.22e-14!25;CL:0000827!2.22e-14!25;CL:0000625!2.43e-11!11;CL:0000988!6.92e-09!182;CL:0000037!3.18e-08!172;CL:0000566!3.18e-08!172;CL:0002032!7.51e-07!165;CL:0000837!7.51e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.96e-24;18!CL:0000789;2.96e-24;18!CL:0002419;2.96e-24;18!CL:0000084;5.88e-23;25!CL:0000625;1.60e-18;11!CL:0000542;3.77e-12;53!CL:0000624;5.34e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.77e-25,18;CL:0000789,4.77e-25,18;CL:0002420,4.77e-25,18;CL:0002419,4.77e-25,18;CL:0000790,4.77e-25,18;CL:0000084,2.33e-23,25;CL:0000827,2.33e-23,25;CL:0000838,6.08e-21,52;CL:0000542,1.89e-20,53;CL:0000051,1.89e-20,53;CL:0000625,5.11e-19,11;CL:0000037,2.01e-11,168;CL:0000988,2.26e-11,177;CL:0002032,3.40e-10,161;CL:0000837,3.40e-10,161;CL:0000624,2.43e-09,6;CL:0002087,9.55e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000790;2.96e-24;18!CL:0000051;3.77e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.03e-07!15;UBERON:0000179!2.03e-07!15;UBERON:0000463!2.03e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.32e-08;2!UBERON:0005058;1.32e-08;2!UBERON:0009113;1.32e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.67e-09,4;UBERON:0005058,5.67e-09,4;UBERON:0009113,5.67e-09,4;UBERON:0003295,5.67e-09,4;UBERON:0005562,5.67e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0,0,0,0,0.602694528023977,0,0,0.123121058076788,0.408001382488506,0.313454721478088,0,0,0.125542639594803,0,0,0,0.393364276848904,0.383829398097213,0.464448369948228,0,0,0,0.0774672005803016,0,1.46800219667424,0,0.200544447470142,0.217010870715852,0,0,0,0,0.377875943688809,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63841583378639,0.889509253863555,0.426730222566507,0.400395987036012,1.14950487990897,1.32208974556972,0.954053754535364,0,0.587237189370939,1.91136614062614,3.96513985737078,0.560508562981536,0.526768169550154,0.590129310341499,1.57204305099666,1.85041349099558,1.33749196312542,1.30368906653436,1.4203434172042,1.94826728407911,0.891283655081389,0.294605907474837,0,0.270803863765016,1.79327847615945,1.56071217071854,2.30213066445147,1.65810010671509,1.44901542867526,1.63115219478266,0.802622484269139,1.04535523804977,1.47302145506836,1.91610246800961,1.37450978193052,0.759059076058509,0.637130828648193,0.651083453856419,1.90090408889675,1.95747654801105,2.68771883424279,1.24930726552346,1.65744076430812,2.46338399076314,0.604820229674197,1.33720097891754,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0.263504357079378,0.261958150995425,0,0.370784442784429,0,0,0,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0.258416759169329,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0.386521706326594,0.545492241181669,0.286804595389004,0.487894824518382,0.530119073285941,0.580969714347592,0.725627385107593,0.756962552626885,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,15.8926715789274,0,0,0,1.1240175325762,0.100528972411631,0.0925884451585296,0,1.03993478527958,0,0.231860809950154,0.117408694235822,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0.43596006883328,0,0,0,0.845302752556,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0.896681151948218,0.985153801009636,1.94064817373566,1.66845947163673,0.508189248444927,0,0.773288812777695,1.00509759200609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.82707210449155,0,0.640365346820666,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0.116210378459959,0,0,0.0920809889358963,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,1.13733384070897,0.340187410553031,0,0,0,0.501689773854853,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0,0.137836572484531,0,0,0,0,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54907405947211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0.507447609232169,0,1.70894156152249,0.714695326373367,0.822724546172388,1.29694662238543,0,0.79312517629427,0,0,0,0.371606350251437,0,1.20941133692304,1.11598390910176,1.1974762285969,0.766021480529467,1.48171507906718,0.973865820823666,1.12318871245384,0,0,5.01268954180134,0.50787533340481,0,0,0.425846237690326,2.40453741329035,0,0,0,0,0,3.69262196843137,0,1.6653598399891,1.4098700508785,0,0.146508179271894,0.121360521749513,0.111443384277478,0,0,0,0,0,0.281338832821026,0,0,2.11125408127993,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0.520874984799877,0,0,0,0.221158519862449,0,0.219385397153973,0,0.139423744278603,0.0769502585037971,0,0.23056390438806,0,1.52106320690811,0,0,0,0,0.470940769185074,0.997270091400938,0,0,0,0,0.794682894901893,0,0,0,0,0.995261931078505,0,0,1.18608451472249,0.247127877893006,0.313265848516366,0,0,0,0,0,0,0,0,0.91821828489147,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0.391102765469606,0,0.213452994739353,0,0.288180834308212,0,0,0,0,0.235694034616795,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.803765742325096,0.550157746388935,1.24632101408756,0,0,0,0,0.0788057072991982,0.104909176269996,0.105600336519406,0,0,0,0,0,0,0,0,0,0.492555124496034,0,0.339936274560377,0,0,0,0.26446520348538,0,0,0,0.157204305099666,0,1.9846640872478,0.395223263795889,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.110929051536852,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657852148736121,0,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0.622077260032973,0,0,0,0.436838552768056,0,0,0.371807292777007,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413373593002368,0.0634158101939068,0,0,0.496211178389294,0,0,0.535701835878287,0.33628372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| ||
|short_description=p@chr12:2800993..2801018,- | |short_description=p@chr12:2800993..2801018,- | ||
}} | }} |
Latest revision as of 07:55, 24 July 2015
Short description: | p@chr12:2800993..2801018, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:2800993..2801018, - |
Coexpression cluster: | C3275_Hodgkin_acute_thymus_CD34_CD133_granulocyte_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.77e-25 | 18 |
alpha-beta T cell | 4.77e-25 | 18 |
immature T cell | 4.77e-25 | 18 |
mature T cell | 4.77e-25 | 18 |
immature alpha-beta T cell | 4.77e-25 | 18 |
T cell | 2.33e-23 | 25 |
pro-T cell | 2.33e-23 | 25 |
lymphoid lineage restricted progenitor cell | 6.08e-21 | 52 |
lymphocyte | 1.89e-20 | 53 |
common lymphoid progenitor | 1.89e-20 | 53 |
CD8-positive, alpha-beta T cell | 5.11e-19 | 11 |
hematopoietic stem cell | 2.01e-11 | 168 |
hematopoietic cell | 2.26e-11 | 177 |
hematopoietic oligopotent progenitor cell | 3.40e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.40e-10 | 161 |
CD4-positive, alpha-beta T cell | 2.43e-09 | 6 |
nongranular leukocyte | 9.55e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
thymus | 5.67e-09 | 4 |
hemolymphoid system gland | 5.67e-09 | 4 |
thymic region | 5.67e-09 | 4 |
pharyngeal gland | 5.67e-09 | 4 |
thymus primordium | 5.67e-09 | 4 |