FFCP PHASE1:Hg19::chr12:30881649..30881653,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:30881649..30881653,- | |||
|description=CAGE_peak_at_chr12:30881649..30881653,- | |description=CAGE_peak_at_chr12:30881649..30881653,- | ||
|id=chr12:30881649..30881653,- | |id=chr12:30881649..30881653,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002379;1.80e-10;1!CL:0000511;5.78e-10;1!CL:0002625;5.78e-10;1!CL:0000216;5.78e-10;1!CL:0002591;5.78e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,1.80e-10,1;CL:0000511,3.10e-10,1;CL:0002625,3.10e-10,1;CL:0000216,3.10e-10,1;CL:0002591,8.24e-10,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3620;1.80e-10;1!DOID:3565;1.80e-10;1!DOID:3369;5.78e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,1.80e-10,1;DOID:3565,1.80e-10,1;DOID:3369,3.40e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002616!2.16e-08!59;UBERON:0001049!2.18e-08!57;UBERON:0005068!2.18e-08!57;UBERON:0006241!2.18e-08!57;UBERON:0007135!2.18e-08!57;UBERON:0001017!2.82e-08!82;UBERON:0002020!3.06e-08!34;UBERON:0003528!3.06e-08!34;UBERON:0000073!3.97e-08!94;UBERON:0001016!3.97e-08!94;UBERON:0002780!5.49e-08!41;UBERON:0001890!5.49e-08!41;UBERON:0006240!5.49e-08!41;UBERON:0005743!1.04e-07!86;UBERON:0003080!1.44e-07!42;UBERON:0000955!1.91e-07!69;UBERON:0006238!1.91e-07!69;UBERON:0003075!3.97e-07!86;UBERON:0007284!3.97e-07!86;UBERON:0001893!5.62e-07!34;UBERON:0001869!5.67e-07!32;UBERON:0002791!7.53e-07!33 | |ontology_enrichment_uberon=UBERON:0002616!2.16e-08!59;UBERON:0001049!2.18e-08!57;UBERON:0005068!2.18e-08!57;UBERON:0006241!2.18e-08!57;UBERON:0007135!2.18e-08!57;UBERON:0001017!2.82e-08!82;UBERON:0002020!3.06e-08!34;UBERON:0003528!3.06e-08!34;UBERON:0000073!3.97e-08!94;UBERON:0001016!3.97e-08!94;UBERON:0002780!5.49e-08!41;UBERON:0001890!5.49e-08!41;UBERON:0006240!5.49e-08!41;UBERON:0005743!1.04e-07!86;UBERON:0003080!1.44e-07!42;UBERON:0000955!1.91e-07!69;UBERON:0006238!1.91e-07!69;UBERON:0003075!3.97e-07!86;UBERON:0007284!3.97e-07!86;UBERON:0001893!5.62e-07!34;UBERON:0001869!5.67e-07!32;UBERON:0002791!7.53e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.06e-10;8!UBERON:0001136;5.78e-10;1!UBERON:0001343;5.78e-10;1!UBERON:0004910;5.78e-10;1!UBERON:0004813;5.78e-10;1!UBERON:0001264;2.59e-08;10!UBERON:0003135;1.05e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.16e-10,8;UBERON:0001136,3.10e-10,1;UBERON:0001343,3.10e-10,1;UBERON:0004910,3.10e-10,1;UBERON:0005154,3.10e-10,1;UBERON:0005295,3.10e-10,1;UBERON:0004813,3.10e-10,1;UBERON:0005297,3.10e-10,1;UBERON:0005294,3.10e-10,1;UBERON:0010141,3.10e-10,1;UBERON:0005891,3.10e-10,1;UBERON:0002323,1.85e-08,46;UBERON:0001264,2.28e-08,10;UBERON:0004458,6.79e-08,49;UBERON:0003135,1.09e-07,11;UBERON:0003886,4.29e-07,54 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0.602694528023977,0,0,0,0,0,0.286235987131057,0.136874425072884,0.251085279189606,0.152826811495903,0,0,0,0,0,0,0,0,0.154934401160603,0.142169232487422,0,0,0.200544447470142,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0.236482229888585,0,0.645484683583826,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0.167186495390678,0.651844533267181,0,0,0,0,0.221533894583621,0.270803863765016,0.128091319725675,0,0,0,0,0.296573126324121,0.267540828089713,0,0,0,0,0.506039384039006,0,0,0,0,0,1.24930726552346,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0.795285947051099,0,0.189069634328136,0.443458794925128,0.351339142772504,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0,0,0,0,0.81014194788176,0.17859945656816,0,0,0,0,0,0,0,0,1.49091585508596,0.25326102332916,0.397227542439656,2.86836620748814,0.709336764396714,0,0,0.24666754841716,0,0.538842688278752,0.490385709340376,0,0,0,0.312160076830321,0,0,0,0,0.140450806702248,0,0.245668634623536,0.309977343527296,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0.89694817844431,0,0,0.900273288253207,0.412210116953756,0.257640540045629,0.37223371266318,0.337552664482532,0.292311015483596,0.252433774244115,0.0920498986422993,0,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0,0.397589304964456,0.232387885739037,0.310983165046111,0.504641701751257,0,0,0.643240938192885,0,0,0,0,0,0,0.220587945464788,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,1.44331342025273,0.34779121492523,0,0,0,0.190254152234598,0,0,0.246217006087397,0.234004265139238,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0.411309970813294,0,0,0,0,0.07333828582095,0,0,0.845302752556,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0.299918973546171,1.2162378064119,0,0,0.239624855491583,0,0,0.434343920002738,0.410952645100767,0,0.224170287987055,0,0.431255149719035,0.513372145118994,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0.356857977594324,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0.460385919864187,0,0.128139149255701,0,0.160853921143607,0,0.308419387605311,0.355123450626254,0.246381468041427,0.519254429183621,0,0,0.601519410909855,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0.784306353074702,0.256450125116389,0,0,0,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0.096670718292122,0,0.460511024178389,0,0.107420244868274,0.290033387828457,0.426133137080504,0,0.330569830721956,0,0.893288987462089,0.30347334256665,1.39453664789186,0.31481234683064,0.6970372701606,0,0,0,0,0.286249773483982,0.372158369359667,0,0.38126038784765,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0.842516912477962,0,0.731140468893853,0,0.136499911407986,0,1.13008116620243,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0.918893600827838,0.507447609232169,0,0.569647187174163,0.238231775457789,0,0,0.540031437238115,0.79312517629427,0.106824071127473,0,0,0,0.144269212976445,0.142283686696828,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0.121360521749513,0,0,0.23874448473769,0.296964680832639,0.614321404198464,0,0.281338832821026,0.111308705022906,0,0,0.19924798825107,0,0,0.102268682502155,0.123084805461069,0,0.539210106883961,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.227586896570999,0,0,0.344743373241465,0.291604613383254,0.347249989866585,0.885741385813839,0.482385754501632,0,1.10579259931225,0.295547618953547,0.219385397153973,0.32681539055697,0,0.0769502585037971,0.227884111694002,0,0.269272933229316,0,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0,0,0.158936578980379,0.421996129056054,0.163232808159148,0.141353071433941,0.865554558968364,0,0,0,0,0,0.104421949505455,0,0,0.702793337176017,0.547364367646998,0,1.21390189767046,0.394584402849391,0,0,0.063186579628488,0,0.103688191397247,0,1.98595173525299,0.627865836814451,1.19472429772959,0,0,0,0.195984794828755,0,0.17472666824203,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0.274083849293502,0,0.0633107959558787,0,0.0801588202515337,0.213452994739353,1.39866726707491,0.432271251462318,0.114536596165916,0.171594997861965,0.864328787928898,1.24252535565433,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0.223171457441873,0,0,0,0.157566364614447,0.329663433524666,0.0674035438541849,0.0984274815147488,0,0,0.408610218334727,0.321506296930038,0.412618309791701,0.83088067605837,0,0,0.121499113316049,0,0,0.0524545881349981,0.211200673038813,0,0,0.714695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| ||
|short_description=p@chr12:30881649..30881653,- | |short_description=p@chr12:30881649..30881653,- | ||
}} | }} |
Latest revision as of 08:03, 24 July 2015
Short description: | p@chr12:30881649..30881653, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:30881649..30881653, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 1.80e-10 | 1 |
androgen binding protein secreting cell | 3.10e-10 | 1 |
seminiferous tubule epithelial cell | 3.10e-10 | 1 |
Sertoli cell | 3.10e-10 | 1 |
smooth muscle cell of the pulmonary artery | 8.24e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 2.16e-10 | 8 |
mesothelium | 3.10e-10 | 1 |
seminiferous tubule of testis | 3.10e-10 | 1 |
epithelium of male gonad | 3.10e-10 | 1 |
epithelial cord | 3.10e-10 | 1 |
sex cord | 3.10e-10 | 1 |
seminiferous tubule epithelium | 3.10e-10 | 1 |
testis sex cord | 3.10e-10 | 1 |
genital ridge | 3.10e-10 | 1 |
primitive sex cord of indifferent gonad | 3.10e-10 | 1 |
coelomic epithelium | 3.10e-10 | 1 |
body cavity | 1.85e-08 | 46 |
pancreas | 2.28e-08 | 10 |
body cavity or lining | 6.79e-08 | 49 |
male reproductive organ | 1.09e-07 | 11 |
body cavity precursor | 4.29e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 1.80e-10 | 1 |
meningioma | 1.80e-10 | 1 |
peripheral primitive neuroectodermal tumor | 3.40e-10 | 1 |