FFCP PHASE1:Hg19::chr12:31272017..31272051,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:31272017..31272051,- to FFCP PHASE1:Hg19::chr12:31272017..31272051,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=354bp_to_uc001rjy.2_5end | |||
|cluster_id=chr12:31272017..31272051,- | |||
|description=CAGE_peak_1_at_uc001rjy.2_5end | |||
|id=chr12:31272017..31272051,- | |||
|ontology_enrichment_celltype=CL:0000133!3.16e-10!59;CL:0002319!1.13e-08!25;CL:0000221!7.44e-08!71;CL:0000333!1.06e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0000082;6.88e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000082,6.68e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!3.45e-09!143;DOID:305!2.73e-07!106;DOID:162!8.45e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:0050615;1.04e-10;16!DOID:1324;4.94e-09;15!DOID:3905;2.46e-08;9!DOID:5409;1.21e-07;4!DOID:3119;3.20e-07;14!DOID:1325;3.48e-07;7!DOID:3904;3.48e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:0050615,8.99e-11,16;DOID:0050687,2.90e-10,143;DOID:1324,4.75e-09,15;DOID:305,1.98e-08,106;DOID:3905,2.16e-08,9;DOID:5409,1.20e-07,4;DOID:162,3.05e-07,235;DOID:1325,3.10e-07,7;DOID:3904,3.10e-07,7;DOID:3119,3.38e-07,14;DOID:14566,6.41e-07,239;DOID:154,8.03e-07,2;DOID:4236,8.03e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000073!6.82e-12!94;UBERON:0001016!6.82e-12!94;UBERON:0005743!1.12e-10!86;UBERON:0001017!8.31e-10!82;UBERON:0000955!7.43e-07!69;UBERON:0006238!7.43e-07!69;UBERON:0002346!8.29e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0004802;6.88e-07;19!UBERON:0000115;6.88e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,6.68e-07,19;UBERON:0000115,6.68e-07,19 | |||
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| ||
|short_description=p1@uc001rjy.2 | |||
}} | }} |
Latest revision as of 08:05, 24 July 2015
Short description: | p1@uc001rjy.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc001rjy.2_5end |
Coexpression cluster: | NA |
Association with transcript: | 354bp_to_uc001rjy.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 6.68e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 6.68e-07 | 19 |
lung epithelium | 6.68e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
respiratory system cancer | 8.99e-11 | 16 |
cell type cancer | 2.90e-10 | 143 |
lung cancer | 4.75e-09 | 15 |
carcinoma | 1.98e-08 | 106 |
lung carcinoma | 2.16e-08 | 9 |
lung small cell carcinoma | 1.20e-07 | 4 |
cancer | 3.05e-07 | 235 |
bronchus cancer | 3.10e-07 | 7 |
bronchogenic carcinoma | 3.10e-07 | 7 |
gastrointestinal system cancer | 3.38e-07 | 14 |
disease of cellular proliferation | 6.41e-07 | 239 |
mixed cell type cancer | 8.03e-07 | 2 |
carcinosarcoma | 8.03e-07 | 2 |