FFCP PHASE1:Hg19::chr12:42754289..42754292,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:42754289..42754292,+
|short_description=p@chr12:42754289..42754292,+
|description=CAGE_peak_at_chr12:42754289..42754292,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:42754289..42754292,+ | |||
|description=CAGE_peak_at_chr12:42754289..42754292,+ | |||
|id=chr12:42754289..42754292,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002032;2.25e-19;1!CL:0000785;2.25e-19;1!CL:0000557;2.25e-19;1!CL:0000819;2.25e-19;1!CL:0002253;2.27e-10;2!CL:0000625;1.61e-07;11!CL:0000623;2.47e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,1.88e-19,1;CL:0000785,2.07e-10,2;CL:0000955,2.07e-10,2;CL:0000818,2.07e-10,2;CL:0000954,2.07e-10,2;CL:0000816,2.07e-10,2;CL:0002253,3.27e-10,2;CL:0000625,1.51e-07,11;CL:0000623,1.82e-07,3;CL:0000825,1.82e-07,3;CL:0000817,2.32e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000954;2.27e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;2.25e-19;1!DOID:8675;2.25e-19;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,1.88e-19,1;DOID:8675,1.88e-19,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002426;2.25e-19;1!UBERON:0003831;2.25e-19;1!UBERON:0003898;2.25e-19;1!UBERON:0004830;2.25e-19;1!UBERON:0003830;2.25e-19;1!UBERON:0005175;2.25e-19;1!UBERON:0001774;2.25e-19;1!UBERON:0001103;2.25e-19;1!UBERON:0005090;2.27e-10;2!UBERON:0001630;2.27e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,1.08e-19,1;UBERON:0003831,1.08e-19,1;UBERON:0003898,1.08e-19,1;UBERON:0004830,1.08e-19,1;UBERON:0003830,1.08e-19,1;UBERON:0005175,1.08e-19,1;UBERON:0001774,1.08e-19,1;UBERON:0001103,1.08e-19,1;UBERON:0010084,1.08e-19,1;UBERON:0005090,1.57e-10,2;UBERON:0001630,1.57e-10,2 | |||
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| ||
|short_description=p@chr12:42754289..42754292,+ | |||
}} | }} |
Latest revision as of 08:28, 24 July 2015
Short description: | p@chr12:42754289..42754292, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:42754289..42754292, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 1.88e-19 | 1 |
mature B cell | 2.07e-10 | 2 |
pre-B-II cell | 2.07e-10 | 2 |
transitional stage B cell | 2.07e-10 | 2 |
small pre-B-II cell | 2.07e-10 | 2 |
immature B cell | 2.07e-10 | 2 |
epithelial cell of large intestine | 3.27e-10 | 2 |
CD8-positive, alpha-beta T cell | 1.51e-07 | 11 |
natural killer cell | 1.82e-07 | 3 |
pro-NK cell | 1.82e-07 | 3 |
precursor B cell | 2.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 1.08e-19 | 1 |
respiratory system muscle | 1.08e-19 | 1 |
skeletal muscle of trunk | 1.08e-19 | 1 |
respiratory system skeletal muscle | 1.08e-19 | 1 |
thoracic segment muscle | 1.08e-19 | 1 |
chest organ | 1.08e-19 | 1 |
muscle of trunk | 1.08e-19 | 1 |
diaphragm | 1.08e-19 | 1 |
future diaphragm | 1.08e-19 | 1 |
muscle structure | 1.57e-10 | 2 |
muscle organ | 1.57e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 1.88e-19 | 1 |
lymphosarcoma | 1.88e-19 | 1 |