FFCP PHASE1:Hg19::chr12:49717819..49717823,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:49717819..49717823,+ | |||
|coexpression_cluster_id=C1002 | |coexpression_cluster_id=C1002 | ||
|description=CAGE_peak_at_chr12:49717819..49717823,+ | |description=CAGE_peak_at_chr12:49717819..49717823,+ | ||
|id=chr12:49717819..49717823,+ | |id=chr12:49717819..49717823,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0000055!1.76e-15!180;CL:0000220!8.89e-11!246;CL:0002321!1.39e-10!248;CL:0000222!1.48e-10!119;CL:0000183!2.27e-10!59;CL:0000393!3.48e-10!60;CL:0000211!3.48e-10!60;CL:0000187!9.52e-10!54;CL:0000003!9.63e-10!722;CL:0000680!1.37e-09!57;CL:0000056!1.37e-09!57;CL:0000355!1.37e-09!57;CL:0000548!4.04e-08!679;CL:0000004!4.04e-08!679;CL:0000255!4.04e-08!679;CL:0000012!7.06e-08!682;CL:0000192!7.20e-08!42;CL:0000514!7.20e-08!42 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000187,2.90e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000178;4.68e-09;15!UBERON:0000179;4.68e-09;15!UBERON:0000463;4.68e-09;15 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.36e-12!110;UBERON:0000490!2.44e-12!138;UBERON:0001009!6.09e-12!113;UBERON:0005256!1.67e-09!143;UBERON:0000914!3.27e-09!83;UBERON:0002329!3.27e-09!83;UBERON:0003077!3.27e-09!83;UBERON:0003059!3.27e-09!83;UBERON:0007282!3.27e-09!83;UBERON:0009618!3.27e-09!83;UBERON:0007285!3.27e-09!83;UBERON:0004290!6.18e-09!70;UBERON:0001134!7.35e-09!61;UBERON:0002036!7.35e-09!61;UBERON:0003082!7.35e-09!61;UBERON:0003104!7.83e-09!238;UBERON:0009142!7.83e-09!238;UBERON:0002049!1.73e-08!79;UBERON:0007798!1.73e-08!79;UBERON:0002385!2.40e-08!63;UBERON:0001015!2.40e-08!63;UBERON:0000383!2.40e-08!63;UBERON:0000486!2.74e-08!82;UBERON:0002100!1.61e-07!216;UBERON:0003914!1.89e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.68e-09;15!UBERON:0000179;4.68e-09;15!UBERON:0000463;4.68e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,8.34e-10,109;UBERON:0001009,2.99e-09,112;UBERON:0000178,4.22e-09,15;UBERON:0000179,4.22e-09,15;UBERON:0000463,4.22e-09,15;UBERON:0000490,5.12e-09,148;UBERON:0002329,5.78e-07,71;UBERON:0003059,5.78e-07,71;UBERON:0007282,5.78e-07,71;UBERON:0004290,5.78e-07,71;UBERON:0009618,5.78e-07,71;UBERON:0003077,8.97e-07,72;UBERON:0007285,8.97e-07,72 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.47440361900905,0.697801167972428,1.74753097704138,0.263766978228454,4.20805600064159,0.331397375727916,0,0,0.730310090387373,0.487932798790507,2.83178433576612,0.408001382488506,0.940364164434263,4.57977579409691,0.684372125364421,1.38096903554283,0.229240217243854,0,0.157421562627358,0,0.767658796194425,0.309632246632152,0,0,0.369754010166788,5.34523684004081,1.42169232487422,0.293600439334847,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0.251248665256743,0,0,0,0,0,0,0,0,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,1.32208974556972,0.954053754535364,0,0,0,0,0,0.263384084775077,0,0,0,1.17030546773475,0,0,0,2.22820913770347,0.294605907474837,0,0.270803863765016,0.384273959177026,0.390178042679635,0.657751618414705,0.276350017785848,3.18783394308558,0,0,0,3.39928028092699,0.383220493601921,0.34362744548263,0.253019692019503,0,0,0,0,0.255973222308837,1.24930726552346,0,0,0,0,0,0,0.670700859703636,1.66221330396589,3.2529523714611,1.50401373190767,0.289693037921647,0.795285947051099,0.486634870302636,3.30871860074237,0.221729397462564,0.527008714158756,0.0654895377488563,0.728590576585084,0,0,0,0,0,0.571994910780128,0.371457501329565,1.98762407366705,0,1.73570250803797,0,0.419499436209906,0.825354125820202,1.25396979922086,0.258416759169329,0.35576626268671,0.33472061276467,1.20848795132744,0.760272105718513,0.24406205754817,0.735326160691737,0.81014194788176,1.51809538082936,0.22452937262617,0.112611480483322,1.53316637465883,4.74632829784064,0.183201743930407,0,0,2.18047026071267,0.496971951695318,1.01304409331664,0,0,0.354668382198357,0,3.20246987189115,0.24666754841716,1.8672662123986,0.134710672069688,0.163461903113459,1.05950199351452,0.576175924479999,2.81185718200556,0,2.85235910772225,0,0.352303495931295,0.161872944368132,0.280901613404497,1.22492502752936,0.859840221182376,0.206651562351531,0,0.247266929278557,1.82032272387605,0.718618141816238,3.53505839303539,0.750711119231785,2.77064115484183,0,0.30648779579902,0.150238058906597,1.24775401476023,0,2.56268866582281,3.17897851739343,0,3.40073346486848,0,2.60563598864226,0.168776332241266,1.36411807225678,0,2.02509777013059,1.77810662500693,0,2.11579406278045,4.23901480776219,0,0.818238361772504,0.286804595389004,0.243947412259191,0,0,0.10366105501537,0,0,6.25798129319264,0,2.76269842704961,0,0,0.709840800239063,0.842923450390509,1.20505514941741,0.882351781859152,0.435758888184812,0.474541238222193,0.808987848960987,0.588664395376038,0,0,0,2.8810180793198,0,0,0,0.590789906681404,0.441463099414651,1.35287282397425,2.05881372358231,0.109750285408626,0,0,0.555530670951178,3.25808305310325,1.03993478527958,0,2.89826012437692,0.352226082707465,1.29929802984966,0.925971025153221,0.570762456703795,3.1608175918371,2.57545848628462,0,0,0,0,0.503946384596579,0.567100388969546,0.53735113621709,0,0.383382679165211,0,0.44024217006613,0,0,0,0.063497894292169,0,2.34434894420094,0,0.205654985406647,0,0.285826432630578,2.13049060256185,0,1.68678057388185,0,28.6125156681506,0,1.32969058292435,1.04007436911366,3.60090323966999,0,0,2.28764789853036,2.17048642156577,0,1.62868092146868,1.06617584622764,0,0,0,0.099972991182057,0,0,0,0.958499421966331,1.14861935834114,1.42636905040718,0.434343920002738,0,0.716243852959582,0.224170287987055,0,0,0,1.27047312111232,0,0.773288812777695,0.502548796003046,0.637938751653163,0,0,0.828831026872071,5.15304265220388,1.00034104211935,0,0.207970861530807,0.713715955188647,0.473107245101804,0,0,0,1.03473071292505,1.99267679560631,0.921845842708516,3.5622281931914,2.93701736194111,0.343143423810856,0,0,0,0,1.66435439510497,0,0,0,0,0.128139149255701,0,0,0,0.925258162815933,0.532685175939381,1.56041596426237,0.519254429183621,0.232420756919918,0.483437798366489,0,0.276242966807689,1.83703117063371,0.364182336013434,0.262248829918848,1.80479845162965,0.693138033939733,4.70609861506113,0,0.949964660035881,0,0,0.215915916102139,0,2.43851793789468,0.501689773854853,1.27438136522519,0.831076008928724,1.11937377361089,9.86669444906706,8.88880533484662,3.33385162651306,3.93617574839647,0.976135183992909,0.103041011647722,0,0,0,0,0,2.99679226705578,0.154048617114644,0.307007349452259,0.137836572484531,1.18162269355101,0.725083469571143,0.426133137080504,3.20515328328254,0.991709492165869,0,0,0,0,0,4.1822236209636,2.7723022215848,1.59691809095107,4.34966496037536,0.37064843820784,0,1.116475108079,0.632758849437452,0,4.60616024360401,0,12.7281299170375,0.78494864019923,2.33834194858309,0.54907405947211,0.589062011728432,0.606547444719948,3.17020642346017,0.421258456238981,4.38870365180631,0.487426979262569,1.05650146756755,1.22849920267187,0.282810863907425,1.13008116620243,5.51365343546124,0,0,0.578775534266688,1.9676842561399,0.811641507850816,0.6196469961995,1.40847801266121,2.58140433967293,0.88424136911809,0.35667105148125,5.67617702512956,1.05553817648832,0,3.03578539012572,2.0996083214699,1.44333169088268,0,1.08890984861323,0.188287601553558,0,1.68471475667626,0,0,12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| ||
|short_description=p@chr12:49717819..49717823,+ | |short_description=p@chr12:49717819..49717823,+ | ||
}} | }} |
Latest revision as of 09:03, 24 July 2015
Short description: | p@chr12:49717819..49717823, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:49717819..49717823, + |
Coexpression cluster: | C1002_Mesenchymal_Whole_Smooth_Renal_osteosarcoma_Fibroblast_Reticulocytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 2.90e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 8.34e-10 | 109 |
circulatory system | 2.99e-09 | 112 |
blood | 4.22e-09 | 15 |
haemolymphatic fluid | 4.22e-09 | 15 |
organism substance | 4.22e-09 | 15 |
unilaminar epithelium | 5.12e-09 | 148 |
somite | 5.78e-07 | 71 |
presomitic mesoderm | 5.78e-07 | 71 |
presumptive segmental plate | 5.78e-07 | 71 |
dermomyotome | 5.78e-07 | 71 |
trunk paraxial mesoderm | 5.78e-07 | 71 |
paraxial mesoderm | 8.97e-07 | 72 |
presumptive paraxial mesoderm | 8.97e-07 | 72 |