FFCP PHASE1:Hg19::chr12:50355525..50355551,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:50355525..50355551,- | |||
|coexpression_cluster_id=C37 | |coexpression_cluster_id=C37 | ||
|description=CAGE_peak_at_chr12:50355525..50355551,- | |description=CAGE_peak_at_chr12:50355525..50355551,- | ||
|id=chr12:50355525..50355551,- | |id=chr12:50355525..50355551,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0000128!2.41e-17!7;CL:0000126!2.41e-17!7;CL:0000127!2.41e-17!7;CL:0002453!2.41e-17!7;CL:0002605!5.37e-09!3;CL:0002603!4.11e-08!3 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease=DOID:3493;2.49e-23;2 | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon=UBERON:0001829;6.38e-24;2!UBERON:0003127;2.79e-23;2!UBERON:0000341;1.01e-22;2!UBERON:0001041;4.37e-20;14!UBERON:0001044;8.66e-18;6!UBERON:0003293;8.66e-18;6!UBERON:0003294;8.66e-18;6!UBERON:0010047;8.66e-18;6!UBERON:0003408;8.66e-18;6!UBERON:0000167;8.66e-18;6!UBERON:0001831;7.03e-13;1!UBERON:0001567;7.03e-13;1!UBERON:0001736;7.88e-13;1!UBERON:0002079;2.20e-12;1!UBERON:0000945;8.31e-10;5!UBERON:0010039;8.31e-10;5!UBERON:0004921;9.95e-10;33!UBERON:0000974;3.31e-08;6!UBERON:0003126;2.60e-07;7!UBERON:0001005;2.60e-07;7!UBERON:0004089;4.56e-07;2!UBERON:0002081;8.06e-07;2 | |ontology_enrichment_development_v019=UBERON:0008801;7.03e-13;1!UBERON:0006298;7.88e-13;1!UBERON:0010227;2.20e-12;1!UBERON:0006242;2.20e-12;1 | ||
|ontology_enrichment_disease=DOID:3493!7.23e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3493;2.49e-23;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,3.12e-23,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.09e-14!115;UBERON:0000153!3.23e-11!129;UBERON:0007811!3.23e-11!129;UBERON:0000033!4.35e-10!123;UBERON:0002616!6.56e-10!59;UBERON:0005743!1.12e-09!86;UBERON:0001049!3.59e-09!57;UBERON:0005068!3.59e-09!57;UBERON:0006241!3.59e-09!57;UBERON:0007135!3.59e-09!57;UBERON:0000073!3.62e-09!94;UBERON:0001016!3.62e-09!94;UBERON:0000955!1.15e-08!69;UBERON:0006238!1.15e-08!69;UBERON:0001017!2.11e-08!82;UBERON:0004121!5.83e-08!169;UBERON:0003075!6.18e-08!86;UBERON:0007284!6.18e-08!86;UBERON:0000924!1.33e-07!173;UBERON:0006601!1.33e-07!173;UBERON:0002346!2.28e-07!90;UBERON:0001829!4.89e-07!2;UBERON:0003127!6.65e-07!2;UBERON:0002037!7.15e-07!6;UBERON:0006215!7.15e-07!6;UBERON:0000341!8.77e-07!2;UBERON:0004733!9.76e-07!12;UBERON:0002028!9.76e-07!12;UBERON:0007277!9.76e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;6.38e-24;2!UBERON:0003127;2.79e-23;2!UBERON:0000341;1.01e-22;2!UBERON:0001041;4.37e-20;14!UBERON:0001044;8.66e-18;6!UBERON:0003293;8.66e-18;6!UBERON:0003294;8.66e-18;6!UBERON:0010047;8.66e-18;6!UBERON:0003408;8.66e-18;6!UBERON:0000167;8.66e-18;6!UBERON:0001831;7.03e-13;1!UBERON:0001567;7.03e-13;1!UBERON:0001736;7.88e-13;1!UBERON:0002079;2.20e-12;1!UBERON:0000945;8.31e-10;5!UBERON:0010039;8.31e-10;5!UBERON:0004921;9.95e-10;33!UBERON:0000974;3.31e-08;6!UBERON:0003126;2.60e-07;7!UBERON:0001005;2.60e-07;7!UBERON:0004089;4.56e-07;2!UBERON:0002081;8.06e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,6.38e-24,2;UBERON:0003127,2.23e-23,2;UBERON:0000341,6.84e-23,2;UBERON:0001044,8.67e-18,6;UBERON:0003293,8.67e-18,6;UBERON:0003294,8.67e-18,6;UBERON:0010047,8.67e-18,6;UBERON:0000167,8.67e-18,6;UBERON:0001831,7.03e-13,1;UBERON:0001567,7.03e-13,1;UBERON:0008801,7.03e-13,1;UBERON:0001736,7.89e-13,1;UBERON:0006298,7.89e-13,1;UBERON:0002079,2.20e-12,1;UBERON:0003408,6.62e-11,10;UBERON:0003126,2.45e-07,7;UBERON:0001005,2.45e-07,7;UBERON:0004089,4.56e-07,2;UBERON:0002081,8.06e-07,2;UBERON:0010227,8.06e-07,2 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0.572471974262113,0.821246550437305,0.627713197974014,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0.413509717453592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,1.9924798825107,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,4.83962864194656,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,2.48578814858586,0,0,0,0,0,2.13452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0.104909176269996,0,0,0,2.1440859791201,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.443568258651136,0,0,0,0.0634158101939068,0,41.6675902811458,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,23.6625047351153,0,0,0,3.6657098967048,0,0,0,7.16496705391274,2.07260472469858,0,0,0,0.485710993059139,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,1.46067277649303,29.8174034212952,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0.267964130156178,0,0,2.98527574661373,1.90451545170992,0,0,0,0,2.02117188958219,0.435433495793923,0.684466602170562,0.471464371102113,2.51027718874367,6.65320713092027,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr12:50355525..50355551,- | |short_description=p@chr12:50355525..50355551,- | ||
}} | }} |
Latest revision as of 09:11, 24 July 2015
Short description: | p@chr12:50355525..50355551, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:50355525..50355551, - |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 6.38e-24 | 2 |
open tracheal system trachea | 2.23e-23 | 2 |
throat | 6.84e-23 | 2 |
saliva-secreting gland | 8.67e-18 | 6 |
gland of oral region | 8.67e-18 | 6 |
gland of foregut | 8.67e-18 | 6 |
oral gland | 8.67e-18 | 6 |
oral cavity | 8.67e-18 | 6 |
parotid gland | 7.03e-13 | 1 |
cheek | 7.03e-13 | 1 |
parotid gland primordium | 7.03e-13 | 1 |
submandibular gland | 7.89e-13 | 1 |
submandibular gland primordium | 7.89e-13 | 1 |
left cardiac atrium | 2.20e-12 | 1 |
gland of gut | 6.62e-11 | 10 |
trachea | 2.45e-07 | 7 |
respiratory airway | 2.45e-07 | 7 |
midface | 4.56e-07 | 2 |
cardiac atrium | 8.06e-07 | 2 |
future cardiac atrium | 8.06e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 3.12e-23 | 2 |