FFCP PHASE1:Hg19::chr12:5198350..5198359,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:5198350..5198359,+ | |||
|coexpression_cluster_id=C182 | |||
|description=CAGE_peak_at_chr12:5198350..5198359,+ | |description=CAGE_peak_at_chr12:5198350..5198359,+ | ||
|id=chr12:5198350..5198359,+ | |id=chr12:5198350..5198359,+ | ||
|ontology_enrichment_celltype=CL:0000349!4.94e-15!3;CL:0002577!4.94e-15!3;CL:0000511!3.27e-12!1;CL:0002625!3.27e-12!1;CL:0000216!3.27e-12!1;CL:0002566!3.65e-12!1;CL:0000864!6.97e-12!1;CL:0000091!6.97e-12!1 | |ontology_enrichment_celltype=CL:0000349!4.94e-15!3;CL:0002577!4.94e-15!3;CL:0000511!3.27e-12!1;CL:0002625!3.27e-12!1;CL:0000216!3.27e-12!1;CL:0002566!3.65e-12!1;CL:0000864!6.97e-12!1;CL:0000091!6.97e-12!1 | ||
|ontology_enrichment_celltype_v019=CL:0000511;3.99e-50;1!CL:0002625;3.99e-50;1!CL:0002566;3.99e-50;1!CL:0000216;3.99e-50;1!CL:0000154;1.44e-09;6!CL:0000138;1.44e-09;6!CL:0000151;3.69e-07;36!CL:0000153;8.37e-07;9!CL:0000447;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,3.99e-50,1;CL:0002625,3.99e-50,1;CL:0000216,3.99e-50,1;CL:0002566,6.58e-50,1;CL:0000058,1.32e-09,6;CL:0000138,1.32e-09,6;CL:0000154,1.44e-09,6;CL:0000153,7.91e-07,9;CL:0000447,7.91e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3571!6.97e-12!1;DOID:5662!1.19e-11!1 | |ontology_enrichment_disease=DOID:3571!6.97e-12!1;DOID:5662!1.19e-11!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003124!3.97e-14!7;UBERON:0005631!2.53e-12!14;UBERON:0000158!2.53e-12!14;UBERON:0001136!3.27e-12!1;UBERON:0001343!3.27e-12!1;UBERON:0004910!3.27e-12!1;UBERON:0005154!3.27e-12!1;UBERON:0005295!3.27e-12!1;UBERON:0004813!3.27e-12!1;UBERON:0005297!3.27e-12!1;UBERON:0005294!3.27e-12!1;UBERON:0010141!3.27e-12!1;UBERON:0005891!3.27e-12!1;UBERON:0001987!1.64e-11!4;UBERON:0004340!1.64e-11!4;UBERON:0000478!2.90e-07!24;UBERON:0004909!9.96e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;3.99e-50;1!UBERON:0001343;3.99e-50;1!UBERON:0004910;3.99e-50;1!UBERON:0004813;3.99e-50;1!UBERON:0004909;7.14e-26;2!UBERON:0005904;1.13e-13;4!UBERON:0000473;1.69e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,3.99e-50,1;UBERON:0001343,3.99e-50,1;UBERON:0004910,3.99e-50,1;UBERON:0005154,3.99e-50,1;UBERON:0005295,3.99e-50,1;UBERON:0004813,3.99e-50,1;UBERON:0005297,3.99e-50,1;UBERON:0005294,3.99e-50,1;UBERON:0010141,3.99e-50,1;UBERON:0005891,3.99e-50,1;UBERON:0004909,7.14e-26,2;UBERON:0005904,1.13e-13,4;UBERON:0000473,1.69e-07,8;UBERON:0004871,1.69e-07,8 | |||
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|short_description=p@chr12:5198350..5198359,+ | |short_description=p@chr12:5198350..5198359,+ | ||
}} | }} |
Latest revision as of 09:22, 24 July 2015
Short description: | p@chr12:5198350..5198359, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:5198350..5198359, + |
Coexpression cluster: | C182_renal_mature_mesothelioma_lung_Mammary_Adipocyte_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 3.99e-50 | 1 |
seminiferous tubule epithelial cell | 3.99e-50 | 1 |
Sertoli cell | 3.99e-50 | 1 |
dark melanocyte | 6.58e-50 | 1 |
chondroblast | 1.32e-09 | 6 |
chondrocyte | 1.32e-09 | 6 |
protein secreting cell | 1.44e-09 | 6 |
GAG secreting cell | 7.91e-07 | 9 |
carbohydrate secreting cell | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 3.99e-50 | 1 |
seminiferous tubule of testis | 3.99e-50 | 1 |
epithelium of male gonad | 3.99e-50 | 1 |
epithelial cord | 3.99e-50 | 1 |
sex cord | 3.99e-50 | 1 |
seminiferous tubule epithelium | 3.99e-50 | 1 |
testis sex cord | 3.99e-50 | 1 |
genital ridge | 3.99e-50 | 1 |
primitive sex cord of indifferent gonad | 3.99e-50 | 1 |
coelomic epithelium | 3.99e-50 | 1 |
epithelium of gonad | 7.14e-26 | 2 |
duct of male reproductive system | 1.13e-13 | 4 |
testis | 1.69e-07 | 8 |
somatic layer of lateral plate mesoderm | 1.69e-07 | 8 |