FFCP PHASE1:Hg19::chr12:52595153..52595169,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:52595153..52595169,-
|short_description=p@chr12:52595153..52595169,-
|description=CAGE_peak_at_chr12:52595153..52595169,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:52595153..52595169,- | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_at_chr12:52595153..52595169,- | |||
|id=chr12:52595153..52595169,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000243;1.27e-16;15!CL:0000125;1.27e-16;15!CL:0000095;5.27e-15;17!CL:0002319;6.56e-11;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,1.27e-16,15;CL:0000125,1.27e-16,15;CL:0000030,1.27e-16,15;CL:0000339,1.27e-16,15;CL:0000095,5.27e-15,17;CL:0000123,5.27e-15,17;CL:0002319,6.56e-11,25;CL:0000333,2.95e-07,41 | |||
|ontology_enrichment_development_v019=UBERON:0006238;5.49e-25;10!UBERON:0003056;4.09e-23;3!CL:0000339;1.27e-16;15 | |||
|ontology_enrichment_disease=DOID:3093!1.95e-09!11 | |||
|ontology_enrichment_disease_v019=DOID:3093;5.14e-23;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,5.14e-23,11 | |||
|ontology_enrichment_uberon=UBERON:0001950!2.05e-29!20;UBERON:0002619!1.03e-26!22;UBERON:0005743!1.90e-26!86;UBERON:0001017!6.88e-25!82;UBERON:0000955!1.02e-23!69;UBERON:0006238!1.02e-23!69;UBERON:0000073!1.25e-23!94;UBERON:0001016!1.25e-23!94;UBERON:0000956!1.92e-23!25;UBERON:0000203!1.92e-23!25;UBERON:0001869!5.67e-22!32;UBERON:0002791!2.86e-21!33;UBERON:0003056!4.83e-21!61;UBERON:0002020!1.31e-20!34;UBERON:0003528!1.31e-20!34;UBERON:0001893!1.31e-20!34;UBERON:0002780!2.64e-20!41;UBERON:0001890!2.64e-20!41;UBERON:0006240!2.64e-20!41;UBERON:0002771!4.65e-20!3;UBERON:0003080!8.81e-20!42;UBERON:0000200!1.14e-17!6;UBERON:0000033!2.12e-17!123;UBERON:0000153!2.01e-16!129;UBERON:0007811!2.01e-16!129;UBERON:0003075!2.41e-16!86;UBERON:0007284!2.41e-16!86;UBERON:0002346!1.73e-15!90;UBERON:0001049!4.26e-14!57;UBERON:0005068!4.26e-14!57;UBERON:0006241!4.26e-14!57;UBERON:0007135!4.26e-14!57;UBERON:0002616!1.49e-13!59;UBERON:0001871!2.55e-13!7;UBERON:0004121!5.34e-13!169;UBERON:0000924!1.31e-12!173;UBERON:0006601!1.31e-12!173;UBERON:0007023!5.16e-10!115;UBERON:0003112!3.58e-08!1;UBERON:0000032!3.58e-08!1;UBERON:0005253!3.58e-08!1;UBERON:0003128!3.58e-08!1;UBERON:0002241!3.58e-08!1;UBERON:0001703!3.58e-08!1;UBERON:0004761!3.58e-08!1;UBERON:0009617!3.58e-08!1;UBERON:0002581!4.71e-08!1;UBERON:0001882!7.59e-08!1;UBERON:0005403!7.59e-08!1;UBERON:0002022!9.94e-08!1;UBERON:0002902!1.21e-07!1;UBERON:0009899!1.21e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.04e-34;2!UBERON:0002757;5.04e-34;2!UBERON:0010134;5.04e-34;2!UBERON:0005408;5.04e-34;2!UBERON:0001899;5.04e-34;2!UBERON:0003296;8.69e-18;4!UBERON:0010133;8.69e-18;4!UBERON:0002784;8.69e-18;4!UBERON:0000966;1.83e-14;5!UBERON:0005388;1.83e-14;5!UBERON:0001802;1.83e-14;5!UBERON:0001894;8.99e-11;7!UBERON:0000955;4.17e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,5.04e-34,2;UBERON:0002757,5.04e-34,2;UBERON:0010134,5.04e-34,2;UBERON:0005408,5.04e-34,2;UBERON:0001899,5.04e-34,2;UBERON:0003296,8.69e-18,4;UBERON:0010133,8.69e-18,4;UBERON:0002784,8.69e-18,4;UBERON:0000966,2.74e-12,6;UBERON:0005388,2.74e-12,6;UBERON:0001802,2.74e-12,6;UBERON:0001894,8.99e-11,7;UBERON:0006222,8.99e-11,7;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0001017,3.31e-08,81;UBERON:0001016,1.68e-07,89 | |||
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|short_description=p@chr12:52595153..52595169,- | |||
}} | }} |
Latest revision as of 09:29, 24 July 2015
Short description: | p@chr12:52595153..52595169, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52595153..52595169, - |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 1.27e-16 | 15 |
glial cell | 1.27e-16 | 15 |
glioblast | 1.27e-16 | 15 |
glioblast (sensu Vertebrata) | 1.27e-16 | 15 |
neuron associated cell | 5.27e-15 | 17 |
neuron associated cell (sensu Vertebrata) | 5.27e-15 | 17 |
neural cell | 6.56e-11 | 25 |
migratory neural crest cell | 2.95e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
pineal body | 5.04e-34 | 2 |
regional part of epithalamus | 5.04e-34 | 2 |
secretory circumventricular organ | 5.04e-34 | 2 |
circumventricular organ | 5.04e-34 | 2 |
epithalamus | 5.04e-34 | 2 |
gland of diencephalon | 8.69e-18 | 4 |
neuroendocrine gland | 8.69e-18 | 4 |
regional part of diencephalon | 8.69e-18 | 4 |
retina | 2.74e-12 | 6 |
photoreceptor array | 2.74e-12 | 6 |
posterior segment of eyeball | 2.74e-12 | 6 |
diencephalon | 8.99e-11 | 7 |
future diencephalon | 8.99e-11 | 7 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
central nervous system | 3.31e-08 | 81 |
nervous system | 1.68e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 5.14e-23 | 11 |