FFCP PHASE1:Hg19::chr12:52595153..52595169,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:52595153..52595169,- | |||
|coexpression_cluster_id=C53 | |coexpression_cluster_id=C53 | ||
|description=CAGE_peak_at_chr12:52595153..52595169,- | |description=CAGE_peak_at_chr12:52595153..52595169,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000243;1.27e-16;15!CL:0000125;1.27e-16;15!CL:0000095;5.27e-15;17!CL:0002319;6.56e-11;25 | |ontology_enrichment_celltype_v019=CL:0000243;1.27e-16;15!CL:0000125;1.27e-16;15!CL:0000095;5.27e-15;17!CL:0002319;6.56e-11;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000243,1.27e-16,15;CL:0000125,1.27e-16,15;CL:0000030,1.27e-16,15;CL:0000339,1.27e-16,15;CL:0000095,5.27e-15,17;CL:0000123,5.27e-15,17;CL:0002319,6.56e-11,25;CL:0000333,2.95e-07,41 | |||
|ontology_enrichment_development_v019=UBERON:0006238;5.49e-25;10!UBERON:0003056;4.09e-23;3!CL:0000339;1.27e-16;15 | |ontology_enrichment_development_v019=UBERON:0006238;5.49e-25;10!UBERON:0003056;4.09e-23;3!CL:0000339;1.27e-16;15 | ||
|ontology_enrichment_disease=DOID:3093!1.95e-09!11 | |ontology_enrichment_disease=DOID:3093!1.95e-09!11 | ||
|ontology_enrichment_disease_v019=DOID:3093;5.14e-23;11 | |ontology_enrichment_disease_v019=DOID:3093;5.14e-23;11 | ||
|ontology_enrichment_disease_v019_2=DOID:3093,5.14e-23,11 | |||
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|short_description=p@chr12:52595153..52595169,- | |short_description=p@chr12:52595153..52595169,- | ||
}} | }} |
Latest revision as of 09:29, 24 July 2015
Short description: | p@chr12:52595153..52595169, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52595153..52595169, - |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 1.27e-16 | 15 |
glial cell | 1.27e-16 | 15 |
glioblast | 1.27e-16 | 15 |
glioblast (sensu Vertebrata) | 1.27e-16 | 15 |
neuron associated cell | 5.27e-15 | 17 |
neuron associated cell (sensu Vertebrata) | 5.27e-15 | 17 |
neural cell | 6.56e-11 | 25 |
migratory neural crest cell | 2.95e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
pineal body | 5.04e-34 | 2 |
regional part of epithalamus | 5.04e-34 | 2 |
secretory circumventricular organ | 5.04e-34 | 2 |
circumventricular organ | 5.04e-34 | 2 |
epithalamus | 5.04e-34 | 2 |
gland of diencephalon | 8.69e-18 | 4 |
neuroendocrine gland | 8.69e-18 | 4 |
regional part of diencephalon | 8.69e-18 | 4 |
retina | 2.74e-12 | 6 |
photoreceptor array | 2.74e-12 | 6 |
posterior segment of eyeball | 2.74e-12 | 6 |
diencephalon | 8.99e-11 | 7 |
future diencephalon | 8.99e-11 | 7 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
central nervous system | 3.31e-08 | 81 |
nervous system | 1.68e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 5.14e-23 | 11 |