FFCP PHASE1:Hg19::chr12:52908461..52908496,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-230bp_to_CU687195_5end | |association_with_transcript=-230bp_to_CU687195_5end | ||
|cluster_id=chr12:52908461..52908496,+ | |||
|coexpression_cluster_id=C207 | |||
|description=CAGE_peak_2_at_CU687195_5end | |description=CAGE_peak_2_at_CU687195_5end | ||
|id=chr12:52908461..52908496,+ | |id=chr12:52908461..52908496,+ | ||
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|ontology_enrichment_development_v019=CL:0000357;6.35e-13;6!CL:0000114;6.35e-13;6!CL:0000223;3.07e-09;58 | |||
|ontology_enrichment_disease=DOID:1749!5.36e-17!14 | |ontology_enrichment_disease=DOID:1749!5.36e-17!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p2@CU687195 | |short_description=p2@CU687195 | ||
}} | }} |
Latest revision as of 09:34, 24 July 2015
Short description: | p2@CU687195 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CU687195_5end |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | -230bp_to_CU687195_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 1.16e-25 | 14 |
endo-epithelial cell | 2.74e-23 | 42 |
epithelial cell | 5.39e-18 | 253 |
epithelial cell of alimentary canal | 1.24e-16 | 20 |
endodermal cell | 7.30e-16 | 58 |
epithelial cell of Malassez | 1.98e-14 | 3 |
ecto-epithelial cell | 2.24e-14 | 34 |
gingival epithelial cell | 7.64e-14 | 3 |
stratified squamous epithelial cell | 6.26e-13 | 6 |
keratin accumulating cell | 6.26e-13 | 6 |
stratified epithelial cell | 6.26e-13 | 6 |
keratinizing barrier epithelial cell | 6.26e-13 | 6 |
epithelial fate stem cell | 6.26e-13 | 6 |
stratified epithelial stem cell | 6.26e-13 | 6 |
surface ectodermal cell | 6.26e-13 | 6 |
mammary gland epithelial cell | 2.87e-11 | 4 |
transitional epithelial cell | 4.96e-11 | 4 |
urothelial cell | 4.96e-11 | 4 |
corneal epithelial cell | 8.28e-11 | 2 |
keratinocyte | 3.70e-09 | 5 |
acinar cell | 1.06e-08 | 5 |
epidermal cell | 1.57e-08 | 9 |
respiratory epithelial cell | 4.41e-08 | 13 |
placental epithelial cell | 2.19e-07 | 3 |
protein secreting cell | 2.55e-07 | 6 |
epithelial cell of prostate | 5.31e-07 | 3 |
acinar cell of salivary gland | 5.82e-07 | 3 |
embryonic cell | 6.56e-07 | 250 |
bronchial epithelial cell | 9.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
surface structure | 8.94e-19 | 99 |
oral opening | 6.09e-18 | 22 |
head | 8.47e-17 | 56 |
mouth | 3.97e-16 | 29 |
stomodeum | 3.97e-16 | 29 |
orifice | 4.81e-15 | 36 |
anterior region of body | 8.01e-15 | 62 |
craniocervical region | 8.01e-15 | 62 |
gingival epithelium | 7.64e-14 | 3 |
subdivision of head | 1.40e-12 | 49 |
mouth mucosa | 8.91e-12 | 13 |
endoderm-derived structure | 1.82e-11 | 160 |
endoderm | 1.82e-11 | 160 |
presumptive endoderm | 1.82e-11 | 160 |
mammary gland | 2.87e-11 | 4 |
mammary bud | 2.87e-11 | 4 |
mammary ridge | 2.87e-11 | 4 |
mammary placode | 2.87e-11 | 4 |
jaw skeleton | 6.08e-11 | 4 |
splanchnocranium | 6.08e-11 | 4 |
mucosa | 6.76e-10 | 20 |
respiratory system | 7.62e-10 | 74 |
urothelium | 6.53e-09 | 5 |
primary subdivision of cranial skeletal system | 7.67e-09 | 5 |
transitional epithelium | 1.71e-07 | 6 |
protuberance | 1.96e-07 | 6 |
pharyngeal arch | 1.96e-07 | 6 |
embryonic head | 1.96e-07 | 6 |
esophagus | 4.05e-07 | 3 |
esophageal region | 4.05e-07 | 3 |
lower respiratory tract epithelium | 9.63e-07 | 3 |
epithelium of bronchus | 9.63e-07 | 3 |