FFCP PHASE1:Hg19::chr12:52913881..52913889,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:52913881..52913889,+ | |||
|coexpression_cluster_id=C207 | |coexpression_cluster_id=C207 | ||
|description=CAGE_peak_at_chr12:52913881..52913889,+ | |description=CAGE_peak_at_chr12:52913881..52913889,+ | ||
|id=chr12:52913881..52913889,+ | |id=chr12:52913881..52913889,+ | ||
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|ontology_enrichment_celltype_v019=CL:0002159;1.07e-32;14!CL:0002328;1.22e-29;3!CL:0002577;2.16e-28;3!CL:0002202;9.83e-27;9!CL:0002632;9.83e-27;9!CL:0000575;3.85e-20;2!CL:0002368;1.68e-18;13!CL:0000312;8.11e-18;5!CL:0000362;4.04e-17;9!CL:0000240;5.97e-15;6!CL:0000311;5.97e-15;6!CL:0000079;5.97e-15;6!CL:0000237;5.97e-15;6!CL:0000307;7.66e-14;3!CL:0002077;9.64e-13;34!CL:0000244;1.13e-10;4!CL:0000731;1.13e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,9.51e-33,14;CL:0002328,1.34e-29,3;CL:0002577,2.17e-28,3;CL:0002202,1.01e-26,9;CL:0002632,1.01e-26,9;CL:0000575,4.04e-20,2;CL:0002368,1.71e-18,13;CL:0000312,6.26e-18,5;CL:0000362,3.64e-17,9;CL:0000240,4.82e-15,6;CL:0000311,4.82e-15,6;CL:0000079,4.82e-15,6;CL:0000237,4.82e-15,6;CL:0000036,4.82e-15,6;CL:0000357,4.82e-15,6;CL:0000114,4.82e-15,6;CL:0000068,7.42e-14,3;CL:0000069,7.42e-14,3;CL:0000307,7.42e-14,3;CL:0000377,7.42e-14,3;CL:0002077,4.17e-13,34;CL:0000066,3.37e-12,253;CL:0000244,1.05e-10,4;CL:0000731,1.05e-10,4;CL:0002076,8.40e-08,42 | |||
|ontology_enrichment_development_v019=CL:0000357;5.97e-15;6!CL:0000114;5.97e-15;6!CL:0000377;7.66e-14;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3151;1.21e-10;1!DOID:3149;1.21e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,9.97e-11,1;DOID:3149,9.97e-11,1 | |||
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| ||
|short_description=p@chr12:52913881..52913889,+ | |short_description=p@chr12:52913881..52913889,+ | ||
}} | }} |
Latest revision as of 09:38, 24 July 2015
Short description: | p@chr12:52913881..52913889, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52913881..52913889, + |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 9.51e-33 | 14 |
bronchial epithelial cell | 1.34e-29 | 3 |
placental epithelial cell | 2.17e-28 | 3 |
epithelial cell of tracheobronchial tree | 1.01e-26 | 9 |
epithelial cell of lower respiratory tract | 1.01e-26 | 9 |
corneal epithelial cell | 4.04e-20 | 2 |
respiratory epithelial cell | 1.71e-18 | 13 |
keratinocyte | 6.26e-18 | 5 |
epidermal cell | 3.64e-17 | 9 |
stratified squamous epithelial cell | 4.82e-15 | 6 |
keratin accumulating cell | 4.82e-15 | 6 |
stratified epithelial cell | 4.82e-15 | 6 |
keratinizing barrier epithelial cell | 4.82e-15 | 6 |
epithelial fate stem cell | 4.82e-15 | 6 |
stratified epithelial stem cell | 4.82e-15 | 6 |
surface ectodermal cell | 4.82e-15 | 6 |
duct epithelial cell | 7.42e-14 | 3 |
branched duct epithelial cell | 7.42e-14 | 3 |
tracheal epithelial cell | 7.42e-14 | 3 |
tracheoblast | 7.42e-14 | 3 |
ecto-epithelial cell | 4.17e-13 | 34 |
epithelial cell | 3.37e-12 | 253 |
transitional epithelial cell | 1.05e-10 | 4 |
urothelial cell | 1.05e-10 | 4 |
endo-epithelial cell | 8.40e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.34e-29 | 3 |
epithelium of bronchus | 1.34e-29 | 3 |
placenta | 1.80e-21 | 4 |
allantois | 1.80e-21 | 4 |
bronchus | 4.98e-18 | 5 |
tracheobronchial tree | 5.11e-16 | 15 |
lower respiratory tract | 5.11e-16 | 15 |
chorion | 1.54e-12 | 7 |
cornea | 1.54e-10 | 4 |
eye surface | 1.54e-10 | 4 |
optic eminence | 1.54e-10 | 4 |
corneal primordium | 1.54e-10 | 4 |
skin epidermis | 2.17e-10 | 15 |
outer epithelium | 2.17e-10 | 15 |
enveloping layer of ectoderm | 2.17e-10 | 15 |
simple columnar epithelium | 2.87e-10 | 9 |
urothelium | 9.73e-09 | 5 |
transitional epithelium | 2.02e-07 | 6 |
thoracic cavity element | 5.52e-07 | 34 |
thoracic cavity | 5.52e-07 | 34 |
epithelial fold | 6.09e-07 | 47 |
thoracic segment organ | 8.85e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 9.97e-11 | 1 |
keratoacanthoma | 9.97e-11 | 1 |