FFCP PHASE1:Hg19::chr12:53438236..53438270,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:53438236..53438270,+ | |||
|coexpression_cluster_id=C327 | |||
|description=CAGE_peak_at_chr12:53438236..53438270,+ | |||
|id=chr12:53438236..53438270,+ | |||
|ontology_enrichment_celltype=CL:0000148!1.49e-16!10;CL:0000541!1.49e-16!10;CL:0000147!3.46e-11!14;CL:0002567!9.72e-08!3;CL:0000710!3.34e-07!20 | |||
|ontology_enrichment_celltype_v019=CL:0000148;3.99e-21;10!CL:0000147;8.69e-15;14!CL:0002567;2.84e-14;3!CL:0000710;4.96e-10;20!CL:0000075;3.70e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.34e-21,10;CL:0000541,4.34e-21,10;CL:0000147,9.21e-15,14;CL:0002567,3.26e-14,3;CL:0000710,5.16e-10,20;CL:0000075,3.80e-07,27 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.08e-18;82!UBERON:0010122;5.54e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;5.54e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.81e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.29e-56!115;UBERON:0001049!8.64e-46!57;UBERON:0005068!8.64e-46!57;UBERON:0006241!8.64e-46!57;UBERON:0007135!8.64e-46!57;UBERON:0002780!2.00e-38!41;UBERON:0001890!2.00e-38!41;UBERON:0006240!2.00e-38!41;UBERON:0003080!2.69e-37!42;UBERON:0002616!1.45e-36!59;UBERON:0003075!1.89e-34!86;UBERON:0007284!1.89e-34!86;UBERON:0002346!6.71e-34!90;UBERON:0000955!4.07e-33!69;UBERON:0006238!4.07e-33!69;UBERON:0001017!5.36e-33!82;UBERON:0005743!1.05e-32!86;UBERON:0001893!1.46e-32!34;UBERON:0002020!2.52e-32!34;UBERON:0003528!2.52e-32!34;UBERON:0002791!8.36e-31!33;UBERON:0000073!3.39e-30!94;UBERON:0001016!3.39e-30!94;UBERON:0001869!3.91e-29!32;UBERON:0003056!1.11e-24!61;UBERON:0000924!1.48e-22!173;UBERON:0006601!1.48e-22!173;UBERON:0004121!1.81e-22!169;UBERON:0000033!1.53e-21!123;UBERON:0002619!3.47e-21!22;UBERON:0000153!4.64e-21!129;UBERON:0007811!4.64e-21!129;UBERON:0001950!2.95e-18!20;UBERON:0000956!3.65e-18!25;UBERON:0000203!3.65e-18!25;UBERON:0002308!2.47e-17!9;UBERON:0000125!2.47e-17!9;UBERON:0002420!4.78e-17!9;UBERON:0007245!4.78e-17!9;UBERON:0010009!4.78e-17!9;UBERON:0010011!4.78e-17!9;UBERON:0000454!4.78e-17!9;UBERON:0009663!9.73e-14!7;UBERON:0000025!2.56e-12!194;UBERON:0004111!3.00e-12!241;UBERON:0001871!1.27e-11!7;UBERON:0000477!3.39e-10!286;UBERON:0000349!6.09e-10!5;UBERON:0003076!1.16e-09!15;UBERON:0003057!1.16e-09!15;UBERON:0002298!3.06e-09!8;UBERON:0000475!4.33e-09!365;UBERON:0000369!1.50e-08!4;UBERON:0002435!1.50e-08!4;UBERON:0000204!1.50e-08!4;UBERON:0010082!1.50e-08!4;UBERON:0000200!1.82e-08!6;UBERON:0000483!5.92e-08!309;UBERON:0000119!9.66e-08!312;UBERON:0000062!1.68e-07!511;UBERON:0001894!3.37e-07!7;UBERON:0006222!3.37e-07!7;UBERON:0000988!3.39e-07!3;UBERON:0004732!4.02e-07!13;UBERON:0006331!5.85e-07!3;UBERON:0000064!6.14e-07!219;UBERON:0002240!7.88e-07!3;UBERON:0000481!8.14e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.45e-29;41!UBERON:0001890;1.45e-29;41!UBERON:0001893;2.88e-28;34!UBERON:0000073;3.39e-28;53!UBERON:0002616;3.39e-28;53!UBERON:0003528;2.81e-27;34!UBERON:0002020;2.81e-27;34!UBERON:0001869;9.19e-24;32!UBERON:0002791;1.36e-23;32!UBERON:0000125;2.15e-21;9!UBERON:0002308;2.15e-21;9!UBERON:0001950;6.15e-21;20!UBERON:0002619;6.35e-19;22!UBERON:0002298;1.71e-17;6!UBERON:0000955;1.01e-16;68!UBERON:0000956;1.75e-16;25!UBERON:0000203;1.75e-16;25!UBERON:0001017;7.01e-16;75!UBERON:0002420;1.08e-15;9!UBERON:0007245;1.08e-15;9!UBERON:0010009;1.08e-15;9!UBERON:0010011;1.08e-15;9!UBERON:0000454;1.08e-15;9!UBERON:0001016;2.13e-14;83!UBERON:0009663;2.29e-14;7!UBERON:0007023;4.00e-14;114!UBERON:0000988;2.84e-13;3!UBERON:0004732;2.59e-11;13!UBERON:0000200;4.32e-11;6!UBERON:0005162;3.98e-10;2!UBERON:0000122;3.98e-10;2!UBERON:0002784;6.48e-10;4!UBERON:0000369;1.37e-09;4!UBERON:0002435;1.37e-09;4!UBERON:0000204;1.37e-09;4!UBERON:0001894;1.39e-09;7!UBERON:0001871;1.61e-09;6!UBERON:0001897;2.00e-09;2!UBERON:0010225;2.00e-09;2!UBERON:0002148;2.63e-09;2!UBERON:0001829;2.63e-09;2!UBERON:0006331;2.63e-09;2!UBERON:0009662;2.63e-09;2!UBERON:0001873;5.54e-09;2!UBERON:0004733;1.34e-08;12!UBERON:0002028;1.34e-08;12!UBERON:0011216;4.48e-08;132!UBERON:0001044;7.59e-07;6!UBERON:0003293;7.59e-07;6!UBERON:0003294;7.59e-07;6!UBERON:0010047;7.59e-07;6!UBERON:0003408;7.59e-07;6!UBERON:0000167;7.59e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.04e-53,56;UBERON:0005068,2.04e-53,56;UBERON:0006241,2.04e-53,56;UBERON:0007135,2.04e-53,56;UBERON:0000073,1.32e-48,53;UBERON:0002616,1.32e-48,53;UBERON:0000955,3.53e-42,68;UBERON:0006238,3.53e-42,68;UBERON:0002780,1.85e-41,41;UBERON:0001890,1.85e-41,41;UBERON:0003080,1.85e-41,41;UBERON:0006240,1.85e-41,41;UBERON:0003075,3.54e-40,82;UBERON:0007284,3.54e-40,82;UBERON:0001017,4.37e-40,81;UBERON:0007023,1.33e-38,114;UBERON:0001016,3.06e-38,89;UBERON:0002346,5.43e-38,86;UBERON:0010371,2.12e-37,104;UBERON:0001893,3.50e-33,34;UBERON:0003528,7.74e-33,34;UBERON:0002020,7.74e-33,34;UBERON:0003056,4.76e-32,61;UBERON:0001869,1.46e-27,32;UBERON:0004121,1.98e-27,171;UBERON:0000924,1.98e-27,171;UBERON:0006601,1.98e-27,171;UBERON:0002791,2.35e-27,32;UBERON:0010314,5.09e-24,132;UBERON:0000125,2.70e-21,9;UBERON:0002308,2.70e-21,9;UBERON:0001950,8.61e-21,20;UBERON:0002619,8.62e-19,22;UBERON:0002298,2.69e-17,6;UBERON:0000956,2.28e-16,25;UBERON:0000203,2.28e-16,25;UBERON:0002420,1.31e-15,9;UBERON:0007245,1.31e-15,9;UBERON:0010009,1.31e-15,9;UBERON:0010011,1.31e-15,9;UBERON:0000454,1.31e-15,9;UBERON:0011216,2.72e-15,223;UBERON:0009663,2.12e-14,7;UBERON:0000988,4.16e-13,3;UBERON:0003076,9.42e-13,15;UBERON:0003057,9.42e-13,15;UBERON:0004732,3.31e-11,13;UBERON:0000200,3.70e-11,6;UBERON:0000025,5.74e-11,192;UBERON:0005162,3.83e-10,2;UBERON:0000122,3.83e-10,2;UBERON:0004111,5.64e-10,240;UBERON:0002784,7.24e-10,4;UBERON:0000369,1.04e-09,4;UBERON:0002435,1.04e-09,4;UBERON:0000204,1.04e-09,4;UBERON:0010082,1.04e-09,4;UBERON:0001894,1.18e-09,7;UBERON:0006222,1.18e-09,7;UBERON:0001897,1.40e-09,2;UBERON:0010225,1.40e-09,2;UBERON:0001871,2.22e-09,6;UBERON:0002148,4.00e-09,2;UBERON:0006331,4.00e-09,2;UBERON:0009662,4.00e-09,2;UBERON:0001829,4.17e-09,2;UBERON:0001873,5.12e-09,2;UBERON:0010122,5.12e-09,2;UBERON:0004733,1.66e-08,12;UBERON:0002028,1.66e-08,12;UBERON:0007277,1.66e-08,12;UBERON:0000483,1.69e-08,306;UBERON:0000119,2.41e-08,309;UBERON:0001044,9.88e-07,6;UBERON:0003293,9.88e-07,6;UBERON:0003294,9.88e-07,6;UBERON:0010047,9.88e-07,6;UBERON:0000167,9.88e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0,0.414644220061482,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.42888629177713,3.05590740446622,10.5495702489042,5.13217338068116,3.39330725920968,4.20480280981484,3.42991719156694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0.994147647766298,1.1253553312841,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,5.81599647657131,1.02044907978036,0,0,0,0,0,0,0,0,0,0,1.77148277162768,1.20596438625408,0,0,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,4.85288157460875,0,1.87411556580271,0,0,0.242780379534093,0,1.20990716048664,0,0.252746318513952,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,1.45614830698521,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,2.32739144116388,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0.223171457441873,0.335917362433631,0,0,0.315132729228895,0.494495150286999,0.471824806979294,0,0,0.795229689809303,0.544813624446302,0,0,0,0,0,1.15424157650247,0,0,0,0,0,0,0.714695326373367,0,0.25426853765475,0,0,0,0,0,0,0,0,0,2.58565912723101,1.05786081394152,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,1.251909307065,0,1.22021956690538,4.53303741472099,0,0,1.97143852804142,1.99825733481477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52084279766904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,1.73418907760441,0,1.27707087245721,0.82046545696302,0,1.45230230174858,1.13032951942296,9.99385941814081,0,0,0,0,0,0,0,0,0,1.56302802246618,0,0,0,2.16120270778863,0,0.826747186004736,1.45856363445986,0,1.09651553371436,0,0,0,1.07140367175657,0,0,0.227662191351298,0,0,0,2.31097092121228,1.57854656550838,0,0,0.235479278551542,0.471346769748006,0,0,0,0,1.35805433935647,0,0,0.173858272302579,0,0,0,0,2.15113679410139,0,0,0,0,0,0,0,0,0.975343399858155,0,0,3.4794432940146,1.45713297917742,0,0,0,0,0,0,0.385870790539723,0.218559560503957,0,0.245148321753905,0,1.96308467114945,1.78227840196252,0.4226557275834,0,0,0.128915775947154,0,0,0,0,0,2.2936464170227,1.14671666521161,0,2.10773619591836,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0.267964130156178,3.31667775783512,1.86179392551411,0.426467963801962,0,0,0,0,0,0.404234377916439,0,0.684466602170562,0.134704106029175,0.430333232356058,0.99798106963804,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p@chr12:53438236..53438270,+ | |||
}} |
Latest revision as of 09:44, 24 July 2015
Short description: | p@chr12:53438236..53438270, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:53438236..53438270, + |
Coexpression cluster: | C327_Melanocyte_corpus_thalamus_substantia_melanoma_globus_optic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.34e-21 | 10 |
melanoblast | 4.34e-21 | 10 |
pigment cell | 9.21e-15 | 14 |
light melanocyte | 3.26e-14 | 3 |
neurecto-epithelial cell | 5.16e-10 | 20 |
columnar/cuboidal epithelial cell | 3.80e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.81e-09 | 2 |