FFCP PHASE1:Hg19::chr12:53599752..53599790,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:53599752..53599790,+ | |||
|description=CAGE_peak_at_chr12:53599752..53599790,+ | |description=CAGE_peak_at_chr12:53599752..53599790,+ | ||
|id=chr12:53599752..53599790,+ | |id=chr12:53599752..53599790,+ | ||
|ontology_enrichment_celltype=CL:0000945!6.40e-09!24;CL:0000826!6.40e-09!24;CL:0000542!6.65e-08!53;CL:0000051!6.65e-08!53;CL:0000838!2.53e-07!52 | |ontology_enrichment_celltype=CL:0000945!6.40e-09!24;CL:0000826!6.40e-09!24;CL:0000542!6.65e-08!53;CL:0000051!6.65e-08!53;CL:0000838!2.53e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000946;2.46e-13;1!CL:0000786;2.46e-13;1!CL:0002581;6.05e-13;1!CL:0000945;2.80e-12;24!CL:0000054;4.17e-07;2!CL:0000137;4.17e-07;2!CL:0000092;4.17e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,2.62e-13,1;CL:0000786,2.62e-13,1;CL:0000980,2.62e-13,1;CL:0002581,3.76e-13,1;CL:0000945,2.87e-12,24;CL:0000826,2.87e-12,24;CL:0000838,7.82e-08,52;CL:0000542,1.12e-07,53;CL:0000051,1.12e-07,53;CL:0000785,2.74e-07,2;CL:0000955,2.74e-07,2;CL:0000818,2.74e-07,2;CL:0000954,2.74e-07,2;CL:0000816,2.74e-07,2;CL:0000054,3.48e-07,2;CL:0000137,3.48e-07,2;CL:0000092,3.48e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000954;2.66e-07;2 | |||
|ontology_enrichment_disease=DOID:0050686!1.08e-09!137;DOID:14566!1.58e-09!239;DOID:162!4.75e-09!235;DOID:0060058!6.72e-08!10;DOID:2531!5.19e-07!51;DOID:0060083!5.19e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:2355;1.82e-13;1!DOID:0060085;6.05e-13;1!DOID:4960;6.05e-13;1!DOID:3165;6.05e-13;1!DOID:0060121;6.05e-13;1!DOID:2438;6.05e-13;1!DOID:0070004;6.05e-13;1!DOID:4418;6.05e-13;1!DOID:0060058;2.69e-11;10!DOID:2531;6.32e-08;51!DOID:0060083;6.32e-08;51!DOID:74;2.28e-07;2!DOID:200;4.17e-07;2!DOID:4305;4.17e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.74e-14,51;DOID:0060083,6.74e-14,51;DOID:2355,1.82e-13,1;DOID:0060085,4.23e-13,1;DOID:3165,4.23e-13,1;DOID:0060121,4.23e-13,1;DOID:2438,4.23e-13,1;DOID:4418,4.23e-13,1;DOID:4960,9.73e-13,1;DOID:0070004,9.73e-13,1;DOID:0060058,2.65e-11,10;DOID:74,2.28e-07,2;DOID:200,3.48e-07,2;DOID:4305,3.48e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;4.17e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,3.28e-07,2 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.534893840235659,0.328402357799783,0.0787107813136792,0,0.383829398097213,0,0.919421224478927,0,0.739508020333575,0.619737604642413,2.55904618477359,0.293600439334847,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0.212604299965044,0.209658645508376,0.112328631146495,0.450530678524519,0,0,0,0.182664153764634,0,0,0,0,0.800791974072025,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0.411202997999018,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0.194874010322397,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.343135620597051,0,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0.179117045405697,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0.224170287987055,0.197030760201927,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0.215714200818617,0,0,0,0,0,0,0.280660094433074,0,0,0,1.48418066444991,0.308419387605311,0.177561725313127,0.164254312027618,0,0.348631135379878,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0.462145851343933,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0.655894752046633,0,0,0,0.286822704408103,0,0,0,0,0,0.379473173765715,0.349934720244983,0,0.670302275535787,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747768497892312,0,0,0.371606350251437,0.144269212976445,0,0.318852545457645,0,0,0.211673582723883,0,0,0.228234679033192,0.313359791546046,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0.222886768554957,0.852408440419239,0,0,0,0,0,0,0.659215496907038,0,0,0,0,0,1.35393286007176,0,0.269605053441981,0,1.02314474045374,0,0,0,0,0,0,0,0.174919999992391,0,0.227586896570999,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0.269272933229316,0,0,0,0,0,0,0.332423363800313,0,0,0,4.93359705082881,0,0,0,0.424059214301822,0,0,0,0,0.296521128680622,0,0,0,0,0,0.729819156862664,0.19566461893209,0.242780379534093,0,0,0,0.063186579628488,0.300646838828985,0,1.32930774541437,0.330991955875499,0,0,0.284609546029793,0,0.173559738335131,0.0979923974143777,0.174118413160805,0,0.343972064943233,0,0,0,0,0,0,2.32971271899477,1.39100228192093,0,0,0.0801588202515337,0,0,0.288180834308212,0.343609788497747,0.171594997861965,0,0,0,1.08723364858891,0.836822770498666,0,0.288950589901519,0,0,0,0,1.57732412567589,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,3.72562661089452,0,0,0,0,0.415440338029185,0.449947783103001,0,0,0,0,0,0.422401346077626,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0.197611631897944,0.243585196761792,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0.499921631848426,0,0.285465333544967,0,0,0,0.149254802886874,0,0.554805861502613,0,0.50313580350515,0,0,0.151230923763239,0.310874401165561,0,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0.214821114084977,0,0,0.800055529326307,0,0,0,0.385239660814607,0.214441591374926,0,0.226705925512272,0,0,0,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0,0.194860308839388,0,0.490696182767533,0,0,0,0,0.213383459388282,1.03328987796489,0.567515953566836,0.920529751259204,0,0,0,0,0,0.109209638192014,0,0,0,0,0.318004350653419,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.924205329202706,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41991373867136,0,0,0,0.354581522651905,0.222462803784138,0,0,0,0,0.215927591218621,0,0,0,0.23248285073625,0,0,0,0,0,0,0.946656005844523,0.426067023795788,0,0,0,0,0.111855431797792,0,0.487671699929078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09935271517422,0,2.47026410200984,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.252332849670158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0.162806537221949,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0.641136984606466 | |phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.534893840235659,0.328402357799783,0.0787107813136792,0,0.383829398097213,0,0.919421224478927,0,0.739508020333575,0.619737604642413,2.55904618477359,0.293600439334847,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0.212604299965044,0.209658645508376,0.112328631146495,0.450530678524519,0,0,0,0.182664153764634,0,0,0,0,0.800791974072025,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0.411202997999018,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0.194874010322397,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.343135620597051,0,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0.179117045405697,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0.224170287987055,0.197030760201927,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0.215714200818617,0,0,0,0,0,0,0.280660094433074,0,0,0,1.48418066444991,0.308419387605311,0.177561725313127,0.164254312027618,0,0.348631135379878,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0.462145851343933,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0.655894752046633,0,0,0,0.286822704408103,0,0,0,0,0,0.379473173765715,0.349934720244983,0,0.670302275535787,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747768497892312,0,0,0.371606350251437,0.144269212976445,0,0.318852545457645,0,0,0.211673582723883,0,0,0.228234679033192,0.313359791546046,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0.222886768554957,0.852408440419239,0,0,0,0,0,0,0.659215496907038,0,0,0,0,0,1.35393286007176,0,0.269605053441981,0,1.02314474045374,0,0,0,0,0,0,0,0.174919999992391,0,0.227586896570999,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0.269272933229316,0,0,0,0,0,0,0.332423363800313,0,0,0,4.93359705082881,0,0,0,0.424059214301822,0,0,0,0,0.296521128680622,0,0,0,0,0,0.729819156862664,0.19566461893209,0.242780379534093,0,0,0,0.063186579628488,0.300646838828985,0,1.32930774541437,0.330991955875499,0,0,0.284609546029793,0,0.173559738335131,0.0979923974143777,0.174118413160805,0,0.343972064943233,0,0,0,0,0,0,2.32971271899477,1.39100228192093,0,0,0.0801588202515337,0,0,0.288180834308212,0.343609788497747,0.171594997861965,0,0,0,1.08723364858891,0.836822770498666,0,0.288950589901519,0,0,0,0,1.57732412567589,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,3.72562661089452,0,0,0,0,0.415440338029185,0.449947783103001,0,0,0,0,0,0.422401346077626,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0.197611631897944,0.243585196761792,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0.499921631848426,0,0.285465333544967,0,0,0,0.149254802886874,0,0.554805861502613,0,0.50313580350515,0,0,0.151230923763239,0.310874401165561,0,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0.214821114084977,0,0,0.800055529326307,0,0,0,0.385239660814607,0.214441591374926,0,0.226705925512272,0,0,0,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0,0.194860308839388,0,0.490696182767533,0,0,0,0,0.213383459388282,1.03328987796489,0.567515953566836,0.920529751259204,0,0,0,0,0,0.109209638192014,0,0,0,0,0.318004350653419,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.924205329202706,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41991373867136,0,0,0,0.354581522651905,0.222462803784138,0,0,0,0,0.215927591218621,0,0,0,0.23248285073625,0,0,0,0,0,0,0.946656005844523,0.426067023795788,0,0,0,0,0.111855431797792,0,0.487671699929078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09935271517422,0,2.47026410200984,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.252332849670158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0.162806537221949,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0.641136984606466 | ||
|short_description=p@chr12:53599752..53599790,+ | |short_description=p@chr12:53599752..53599790,+ | ||
}} | }} |
Latest revision as of 09:47, 24 July 2015
Short description: | p@chr12:53599752..53599790, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:53599752..53599790, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 2.62e-13 | 1 |
plasma cell | 2.62e-13 | 1 |
plasmablast | 2.62e-13 | 1 |
perirenal preadipocyte | 3.76e-13 | 1 |
lymphocyte of B lineage | 2.87e-12 | 24 |
pro-B cell | 2.87e-12 | 24 |
lymphoid lineage restricted progenitor cell | 7.82e-08 | 52 |
lymphocyte | 1.12e-07 | 53 |
common lymphoid progenitor | 1.12e-07 | 53 |
mature B cell | 2.74e-07 | 2 |
pre-B-II cell | 2.74e-07 | 2 |
transitional stage B cell | 2.74e-07 | 2 |
small pre-B-II cell | 2.74e-07 | 2 |
immature B cell | 2.74e-07 | 2 |
bone matrix secreting cell | 3.48e-07 | 2 |
osteocyte | 3.48e-07 | 2 |
osteoclast | 3.48e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 3.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.74e-14 | 51 |
immune system cancer | 6.74e-14 | 51 |
anemia | 1.82e-13 | 1 |
organ system benign neoplasm | 4.23e-13 | 1 |
skin benign neoplasm | 4.23e-13 | 1 |
integumentary system benign neoplasm | 4.23e-13 | 1 |
dermis tumor | 4.23e-13 | 1 |
cutaneous fibrous histiocytoma | 4.23e-13 | 1 |
bone marrow cancer | 9.73e-13 | 1 |
myeloma | 9.73e-13 | 1 |
lymphoma | 2.65e-11 | 10 |
hematopoietic system disease | 2.28e-07 | 2 |
giant cell tumor | 3.48e-07 | 2 |
bone giant cell tumor | 3.48e-07 | 2 |