FFCP PHASE1:Hg19::chr12:53635669..53635699,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:53635669..53635699,+ | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_at_chr12:53635669..53635699,+ | |description=CAGE_peak_at_chr12:53635669..53635699,+ | ||
|id=chr12:53635669..53635699,+ | |id=chr12:53635669..53635699,+ | ||
|ontology_enrichment_celltype=CL:0002322!3.08e-25!5;CL:0000540!1.12e-12!6;CL:0000031!1.12e-12!6;CL:0000404!1.12e-12!6;CL:0000047!1.23e-09!8;CL:0000133!2.13e-07!59;CL:0002319!2.17e-07!25 | |ontology_enrichment_celltype=CL:0002322!3.08e-25!5;CL:0000540!1.12e-12!6;CL:0000031!1.12e-12!6;CL:0000404!1.12e-12!6;CL:0000047!1.23e-09!8;CL:0000133!2.13e-07!59;CL:0002319!2.17e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0002319;6.85e-09;25!CL:0000243;9.10e-07;15!CL:0000125;9.10e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,6.76e-09,25;CL:0000243,9.10e-07,15;CL:0000125,9.10e-07,15;CL:0000030,9.10e-07,15;CL:0000339,9.10e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0003056;6.51e-34;3!UBERON:0006238;5.79e-10;10!CL:0000339;9.10e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3093;3.27e-09;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,3.27e-09,11 | |||
|ontology_enrichment_uberon=UBERON:0001905!9.07e-18!2;UBERON:0002757!9.07e-18!2;UBERON:0010134!9.07e-18!2;UBERON:0002784!9.07e-18!2;UBERON:0005408!9.07e-18!2;UBERON:0001899!9.07e-18!2;UBERON:0003296!2.45e-09!4;UBERON:0010133!2.45e-09!4;UBERON:0005743!1.25e-07!86;UBERON:0000966!1.32e-07!5;UBERON:0005388!1.32e-07!5;UBERON:0001802!1.32e-07!5;UBERON:0000970!8.59e-07!20;UBERON:0000073!8.93e-07!94;UBERON:0001016!8.93e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.88e-50;2!UBERON:0002757;1.88e-50;2!UBERON:0010134;1.88e-50;2!UBERON:0005408;1.88e-50;2!UBERON:0001899;1.88e-50;2!UBERON:0003296;7.64e-26;4!UBERON:0010133;7.64e-26;4!UBERON:0002784;7.64e-26;4!UBERON:0000966;8.13e-21;5!UBERON:0005388;8.13e-21;5!UBERON:0001802;8.13e-21;5!UBERON:0001894;3.06e-15;7!UBERON:0000970;6.38e-12;20!UBERON:0002104;2.18e-11;21!UBERON:0000020;1.86e-10;23!UBERON:0001032;4.77e-10;24!UBERON:0004456;4.77e-10;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.88e-50,2;UBERON:0002757,1.88e-50,2;UBERON:0010134,1.88e-50,2;UBERON:0005408,1.88e-50,2;UBERON:0001899,1.88e-50,2;UBERON:0003296,7.64e-26,4;UBERON:0010133,7.64e-26,4;UBERON:0002784,7.64e-26,4;UBERON:0000966,1.57e-17,6;UBERON:0005388,1.57e-17,6;UBERON:0001802,1.57e-17,6;UBERON:0001894,3.06e-15,7;UBERON:0006222,3.06e-15,7;UBERON:0000970,2.18e-11,21;UBERON:0002104,2.18e-11,21;UBERON:0000020,4.77e-10,24;UBERON:0001032,4.77e-10,24;UBERON:0004456,4.77e-10,24;UBERON:0001017,1.09e-07,81;UBERON:0001016,5.97e-07,89;UBERON:0003056,7.64e-07,61 | |||
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|short_description=p@chr12:53635669..53635699,+ | |short_description=p@chr12:53635669..53635699,+ | ||
}} | }} |
Latest revision as of 09:48, 24 July 2015
Short description: | p@chr12:53635669..53635699, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:53635669..53635699, + |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 6.76e-09 | 25 |
glial cell (sensu Vertebrata) | 9.10e-07 | 15 |
glial cell | 9.10e-07 | 15 |
glioblast | 9.10e-07 | 15 |
glioblast (sensu Vertebrata) | 9.10e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.88e-50 | 2 |
regional part of epithalamus | 1.88e-50 | 2 |
secretory circumventricular organ | 1.88e-50 | 2 |
circumventricular organ | 1.88e-50 | 2 |
epithalamus | 1.88e-50 | 2 |
gland of diencephalon | 7.64e-26 | 4 |
neuroendocrine gland | 7.64e-26 | 4 |
regional part of diencephalon | 7.64e-26 | 4 |
retina | 1.57e-17 | 6 |
photoreceptor array | 1.57e-17 | 6 |
posterior segment of eyeball | 1.57e-17 | 6 |
diencephalon | 3.06e-15 | 7 |
future diencephalon | 3.06e-15 | 7 |
eye | 2.18e-11 | 21 |
visual system | 2.18e-11 | 21 |
sense organ | 4.77e-10 | 24 |
sensory system | 4.77e-10 | 24 |
entire sense organ system | 4.77e-10 | 24 |
central nervous system | 1.09e-07 | 81 |
nervous system | 5.97e-07 | 89 |
pre-chordal neural plate | 7.64e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 3.27e-09 | 11 |