FFCP PHASE1:Hg19::chr12:56347949..56347964,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-65bp_to_ENST00000554053_5end | |association_with_transcript=-65bp_to_ENST00000554053_5end | ||
|cluster_id=chr12:56347949..56347964,- | |||
|coexpression_cluster_id=C206 | |coexpression_cluster_id=C206 | ||
|description=CAGE_peak_3_at_ENST00000554053_5end | |description=CAGE_peak_3_at_ENST00000554053_5end | ||
|id=chr12:56347949..56347964,- | |id=chr12:56347949..56347964,- | ||
|ontology_enrichment_celltype=CL:0000148!2.77e-59!10;CL:0000541!2.77e-59!10;CL:0000147!2.41e-57!14;CL:0000710!1.13e-29!20;CL:0002567!3.29e-23!3;CL:0000075!5.68e-22!27;CL:0000325!1.84e-20!39;CL:0002077!5.81e-18!33;CL:0002566!7.37e-18!1;CL:0000149!1.22e-17!4;CL:0000333!9.38e-14!41;CL:0000133!1.22e-09!59;CL:0000221!5.16e-08!71;CL:0002586!8.62e-07!3 | |ontology_enrichment_celltype=CL:0000148!2.77e-59!10;CL:0000541!2.77e-59!10;CL:0000147!2.41e-57!14;CL:0000710!1.13e-29!20;CL:0002567!3.29e-23!3;CL:0000075!5.68e-22!27;CL:0000325!1.84e-20!39;CL:0002077!5.81e-18!33;CL:0002566!7.37e-18!1;CL:0000149!1.22e-17!4;CL:0000333!9.38e-14!41;CL:0000133!1.22e-09!59;CL:0000221!5.16e-08!71;CL:0002586!8.62e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000148;6.56e-45;10!CL:0000147;2.02e-32;14!CL:0000710;4.95e-23;20!CL:0002567;9.45e-18;3!CL:0000075;2.47e-17;27!CL:0000149;1.13e-13;4!CL:0002077;8.45e-13;34!CL:0000150;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,6.56e-45,10;CL:0000541,6.56e-45,10;CL:0000147,2.02e-32,14;CL:0000710,4.95e-23,20;CL:0002567,9.46e-18,3;CL:0000075,2.47e-17,27;CL:0002077,5.72e-14,34;CL:0000149,1.00e-13,4;CL:0000333,3.05e-11,41;CL:0000133,3.51e-08,59;CL:0000221,6.92e-07,72;CL:0000150,8.85e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!6.00e-34!2 | |ontology_enrichment_disease=DOID:1909!6.00e-34!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;4.32e-26;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.32e-26,2 | |||
|ontology_enrichment_uberon=UBERON:0000966!3.15e-14!5;UBERON:0005388!3.15e-14!5;UBERON:0001802!3.15e-14!5;UBERON:0000970!4.80e-08!20;UBERON:0002104!1.09e-07!21;UBERON:0000020!4.58e-07!23;UBERON:0001032!8.59e-07!24;UBERON:0004456!8.59e-07!24;UBERON:0001781!8.62e-07!3;UBERON:0001782!8.62e-07!3;UBERON:0005424!8.62e-07!3 | |ontology_enrichment_uberon=UBERON:0000966!3.15e-14!5;UBERON:0005388!3.15e-14!5;UBERON:0001802!3.15e-14!5;UBERON:0000970!4.80e-08!20;UBERON:0002104!1.09e-07!21;UBERON:0000020!4.58e-07!23;UBERON:0001032!8.59e-07!24;UBERON:0004456!8.59e-07!24;UBERON:0001781!8.62e-07!3;UBERON:0001782!8.62e-07!3;UBERON:0005424!8.62e-07!3 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p3@ENST00000554053 | |short_description=p3@ENST00000554053 | ||
}} | }} |
Latest revision as of 10:15, 24 July 2015
Short description: | p3@ENST00000554053 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000554053_5end |
Coexpression cluster: | C206_melanoma_somatostatinoma_nonsmall_small_neuroblastoma_smallcell_pituitary |
Association with transcript: | -65bp_to_ENST00000554053_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 6.56e-45 | 10 |
melanoblast | 6.56e-45 | 10 |
pigment cell | 2.02e-32 | 14 |
neurecto-epithelial cell | 4.95e-23 | 20 |
light melanocyte | 9.46e-18 | 3 |
columnar/cuboidal epithelial cell | 2.47e-17 | 27 |
ecto-epithelial cell | 5.72e-14 | 34 |
visual pigment cell | 1.00e-13 | 4 |
migratory neural crest cell | 3.05e-11 | 41 |
neurectodermal cell | 3.51e-08 | 59 |
ectodermal cell | 6.92e-07 | 72 |
glandular epithelial cell | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
melanoma | 4.32e-26 | 2 |