FFCP PHASE1:Hg19::chr12:66036083..66036098,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=43bp_to_ENST00000539653_5end | |association_with_transcript=43bp_to_ENST00000539653_5end | ||
|cluster_id=chr12:66036083..66036098,- | |||
|coexpression_cluster_id=C341 | |coexpression_cluster_id=C341 | ||
|description=CAGE_peak_3_at_ENST00000539653_5end | |description=CAGE_peak_3_at_ENST00000539653_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000055!1.90e-15!180;CL:0000188!1.69e-12!9;CL:0000680!9.45e-09!57;CL:0000056!9.45e-09!57;CL:0000355!9.45e-09!57;CL:0002551!8.16e-08!6;CL:0000187!8.48e-08!54;CL:0000148!1.13e-07!10;CL:0000541!1.13e-07!10;CL:0002567!1.88e-07!3;CL:0000183!5.78e-07!59;CL:0002582!5.82e-07!3;CL:0002573!7.17e-07!2;CL:0000393!8.16e-07!60;CL:0000211!8.16e-07!60 | |ontology_enrichment_celltype=CL:0000055!1.90e-15!180;CL:0000188!1.69e-12!9;CL:0000680!9.45e-09!57;CL:0000056!9.45e-09!57;CL:0000355!9.45e-09!57;CL:0002551!8.16e-08!6;CL:0000187!8.48e-08!54;CL:0000148!1.13e-07!10;CL:0000541!1.13e-07!10;CL:0002567!1.88e-07!3;CL:0000183!5.78e-07!59;CL:0002582!5.82e-07!3;CL:0002573!7.17e-07!2;CL:0000393!8.16e-07!60;CL:0000211!8.16e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0002551;1.89e-25;6!CL:0002567;4.12e-23;3!CL:0000054;1.12e-09;2!CL:0000137;1.12e-09;2!CL:0000092;1.12e-09;2!CL:0000148;1.33e-07;10!CL:0002620;4.26e-07;23 | |ontology_enrichment_celltype_v019=CL:0002551;1.89e-25;6!CL:0002567;4.12e-23;3!CL:0000054;1.12e-09;2!CL:0000137;1.12e-09;2!CL:0000092;1.12e-09;2!CL:0000148;1.33e-07;10!CL:0002620;4.26e-07;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002551,2.14e-25,6;CL:0002567,3.68e-23,3;CL:0000054,1.12e-09,2;CL:0000137,1.12e-09,2;CL:0000092,1.12e-09,2;CL:0000148,1.29e-07,10;CL:0000541,1.29e-07,10;CL:0002620,4.40e-07,23 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060085;5.26e-18;1!DOID:3165;5.26e-18;1!DOID:0060121;5.26e-18;1!DOID:2438;5.26e-18;1!DOID:4418;5.26e-18;1!DOID:200;1.12e-09;2!DOID:4305;1.12e-09;2!DOID:4556;6.14e-07;3 | |ontology_enrichment_disease_v019=DOID:0060085;5.26e-18;1!DOID:3165;5.26e-18;1!DOID:0060121;5.26e-18;1!DOID:2438;5.26e-18;1!DOID:4418;5.26e-18;1!DOID:200;1.12e-09;2!DOID:4305;1.12e-09;2!DOID:4556;6.14e-07;3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060085,5.26e-18,1;DOID:3165,5.26e-18,1;DOID:0060121,5.26e-18,1;DOID:2438,5.26e-18,1;DOID:4418,5.26e-18,1;DOID:200,1.12e-09,2;DOID:4305,1.12e-09,2;DOID:4556,6.14e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0004290!3.90e-11!70;UBERON:0000486!4.92e-09!82;UBERON:0000914!6.90e-09!83;UBERON:0002329!6.90e-09!83;UBERON:0003077!6.90e-09!83;UBERON:0003059!6.90e-09!83;UBERON:0007282!6.90e-09!83;UBERON:0009618!6.90e-09!83;UBERON:0007285!6.90e-09!83;UBERON:0001134!5.05e-08!61;UBERON:0002036!5.05e-08!61;UBERON:0003082!5.05e-08!61;UBERON:0002385!1.08e-07!63;UBERON:0001015!1.08e-07!63;UBERON:0000383!1.08e-07!63 | |ontology_enrichment_uberon=UBERON:0004290!3.90e-11!70;UBERON:0000486!4.92e-09!82;UBERON:0000914!6.90e-09!83;UBERON:0002329!6.90e-09!83;UBERON:0003077!6.90e-09!83;UBERON:0003059!6.90e-09!83;UBERON:0007282!6.90e-09!83;UBERON:0009618!6.90e-09!83;UBERON:0007285!6.90e-09!83;UBERON:0001134!5.05e-08!61;UBERON:0002036!5.05e-08!61;UBERON:0003082!5.05e-08!61;UBERON:0002385!1.08e-07!63;UBERON:0001015!1.08e-07!63;UBERON:0000383!1.08e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0002067;3.25e-17;9 | |ontology_enrichment_uberon_v019=UBERON:0002067;3.25e-17;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002067,3.53e-17,9;UBERON:0004016,3.53e-17,9;UBERON:0010083,3.53e-17,9;UBERON:0002097,9.00e-07,41 | |||
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| ||
|short_description=p3@ENST00000539653 | |short_description=p3@ENST00000539653 | ||
}} | }} |
Latest revision as of 11:26, 24 July 2015
Short description: | p3@ENST00000539653 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000539653_5end |
Coexpression cluster: | C341_giant_large_Fibroblast_Mesenchymal_Alveolar_Mesothelial_mesothelioma |
Association with transcript: | 43bp_to_ENST00000539653_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of dermis | 2.14e-25 | 6 |
light melanocyte | 3.68e-23 | 3 |
bone matrix secreting cell | 1.12e-09 | 2 |
osteocyte | 1.12e-09 | 2 |
osteoclast | 1.12e-09 | 2 |
melanocyte | 1.29e-07 | 10 |
melanoblast | 1.29e-07 | 10 |
skin fibroblast | 4.40e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
dermis | 3.53e-17 | 9 |
dermatome | 3.53e-17 | 9 |
future dermis | 3.53e-17 | 9 |
skin of body | 9.00e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 5.26e-18 | 1 |
skin benign neoplasm | 5.26e-18 | 1 |
integumentary system benign neoplasm | 5.26e-18 | 1 |
dermis tumor | 5.26e-18 | 1 |
cutaneous fibrous histiocytoma | 5.26e-18 | 1 |
giant cell tumor | 1.12e-09 | 2 |
bone giant cell tumor | 1.12e-09 | 2 |
lung large cell carcinoma | 6.14e-07 | 3 |