FFCP PHASE1:Hg19::chr12:66036219..66036262,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-67bp_to_ENST00000544557_5end | |association_with_transcript=-67bp_to_ENST00000544557_5end | ||
|cluster_id=chr12:66036219..66036262,- | |||
|coexpression_cluster_id=C341 | |||
|description=CAGE_peak_1_at_ENST00000544557_5end | |description=CAGE_peak_1_at_ENST00000544557_5end | ||
|id=chr12:66036219..66036262,- | |id=chr12:66036219..66036262,- | ||
|ontology_enrichment_celltype=CL:0000055!2.47e-19!180;CL:0000680!3.65e-16!57;CL:0000056!3.65e-16!57;CL:0000355!3.65e-16!57;CL:0000220!7.31e-16!246;CL:0002321!1.45e-15!248;CL:0002371!6.08e-15!591;CL:0000187!1.85e-13!54;CL:0000144!2.35e-13!625;CL:0000183!8.71e-13!59;CL:0000393!2.05e-12!60;CL:0000211!2.05e-12!60;CL:0000548!7.74e-11!679;CL:0000004!7.74e-11!679;CL:0000255!7.74e-11!679;CL:0000012!1.24e-10!682;CL:0002551!2.56e-10!6;CL:0000192!3.48e-10!42;CL:0000514!3.48e-10!42;CL:0000048!4.29e-10!430;CL:0000723!4.79e-10!436;CL:0000222!1.87e-09!119;CL:0000034!2.07e-09!444;CL:0002620!4.03e-08!23;CL:0000003!4.75e-08!722 | |ontology_enrichment_celltype=CL:0000055!2.47e-19!180;CL:0000680!3.65e-16!57;CL:0000056!3.65e-16!57;CL:0000355!3.65e-16!57;CL:0000220!7.31e-16!246;CL:0002321!1.45e-15!248;CL:0002371!6.08e-15!591;CL:0000187!1.85e-13!54;CL:0000144!2.35e-13!625;CL:0000183!8.71e-13!59;CL:0000393!2.05e-12!60;CL:0000211!2.05e-12!60;CL:0000548!7.74e-11!679;CL:0000004!7.74e-11!679;CL:0000255!7.74e-11!679;CL:0000012!1.24e-10!682;CL:0002551!2.56e-10!6;CL:0000192!3.48e-10!42;CL:0000514!3.48e-10!42;CL:0000048!4.29e-10!430;CL:0000723!4.79e-10!436;CL:0000222!1.87e-09!119;CL:0000034!2.07e-09!444;CL:0002620!4.03e-08!23;CL:0000003!4.75e-08!722 | ||
|ontology_enrichment_celltype_v019=CL:0002551;1.10e-16;6!CL:0000188;2.21e-15;9!CL:0000680;2.49e-13;7!CL:0002567;9.88e-13;3!CL:0000594;3.30e-12;3!CL:0002559;5.42e-12;5!CL:0000148;1.39e-09;10!CL:1000306;3.32e-09;4!CL:0002547;3.32e-09;4!CL:0002561;2.23e-08;2!CL:0000187;2.31e-08;55!CL:0002595;5.85e-07;5!CL:0000147;9.48e-07;14!CL:0000393;9.76e-07;61!CL:0000211;9.76e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002551,9.08e-17,6;CL:0000188,2.13e-15,9;CL:0000680,1.15e-14,58;CL:0000056,1.15e-14,58;CL:0000355,1.15e-14,58;CL:0002567,1.05e-12,3;CL:0000594,3.12e-12,3;CL:0002559,4.75e-12,5;CL:0000187,5.40e-12,55;CL:0000393,1.74e-10,61;CL:0000211,1.74e-10,61;CL:0000148,1.43e-09,10;CL:0000541,1.43e-09,10;CL:1000306,3.47e-09,4;CL:0002547,3.47e-09,4;CL:0002321,1.23e-08,250;CL:0002561,2.23e-08,2;CL:0000333,4.58e-07,41;CL:0002595,5.09e-07,5;CL:0000147,9.67e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000355;1.75e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!5.77e-22!70;UBERON:0000486!4.33e-19!82;UBERON:0000914!1.33e-18!83;UBERON:0002329!1.33e-18!83;UBERON:0003077!1.33e-18!83;UBERON:0003059!1.33e-18!83;UBERON:0007282!1.33e-18!83;UBERON:0009618!1.33e-18!83;UBERON:0007285!1.33e-18!83;UBERON:0001134!1.71e-14!61;UBERON:0002036!1.71e-14!61;UBERON:0003082!1.71e-14!61;UBERON:0002385!9.62e-14!63;UBERON:0001015!9.62e-14!63;UBERON:0000383!9.62e-14!63;UBERON:0002067!2.35e-11!9;UBERON:0004016!2.35e-11!9;UBERON:0010083!2.35e-11!9;UBERON:0005256!2.18e-09!143;UBERON:0002199!2.49e-09!45;UBERON:0002416!2.49e-09!45;UBERON:0004573!5.22e-09!33;UBERON:0004571!5.22e-09!33;UBERON:0000055!6.89e-09!69;UBERON:0002097!1.00e-07!40;UBERON:0000490!1.29e-07!138;UBERON:0001637!4.11e-07!42;UBERON:0003509!4.11e-07!42;UBERON:0004572!4.11e-07!42;UBERON:0002049!7.25e-07!79;UBERON:0007798!7.25e-07!79;UBERON:0001981!7.57e-07!60;UBERON:0007500!7.57e-07!60;UBERON:0004537!7.57e-07!60;UBERON:0006965!7.57e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;1.76e-20;9!UBERON:0001134;2.66e-14;16!UBERON:0002036;2.66e-14;16!UBERON:0002073;5.42e-12;5!UBERON:0002385;2.33e-10;31!UBERON:0001015;2.33e-10;31!UBERON:0000383;2.33e-10;31!UBERON:0004797;3.32e-09;4!UBERON:0000415;3.32e-09;4!UBERON:0007240;3.32e-09;4!UBERON:0005742;3.32e-09;4!UBERON:0005734;3.32e-09;4!UBERON:0004664;3.32e-09;4!UBERON:0004663;3.32e-09;4!UBERON:0005933;2.23e-08;2!UBERON:0005942;2.23e-08;2!UBERON:0005932;2.23e-08;2!UBERON:0004573;2.33e-07;33!UBERON:0004571;2.33e-07;33!UBERON:0003834;5.85e-07;5!UBERON:0001533;5.85e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,6.59e-25,71;UBERON:0003059,6.59e-25,71;UBERON:0007282,6.59e-25,71;UBERON:0004290,6.59e-25,71;UBERON:0009618,6.59e-25,71;UBERON:0003077,1.77e-24,72;UBERON:0007285,1.77e-24,72;UBERON:0007503,3.62e-24,78;UBERON:0007524,4.63e-24,73;UBERON:0002067,1.29e-20,9;UBERON:0004016,1.29e-20,9;UBERON:0010083,1.29e-20,9;UBERON:0000486,1.91e-20,83;UBERON:0001134,1.83e-13,62;UBERON:0002036,1.83e-13,62;UBERON:0003082,1.83e-13,62;UBERON:0005256,2.92e-13,122;UBERON:0002385,6.39e-13,64;UBERON:0001015,6.39e-13,64;UBERON:0000383,6.39e-13,64;UBERON:0002073,4.75e-12,5;UBERON:0005086,4.75e-12,5;UBERON:0000490,6.30e-10,148;UBERON:0000415,3.47e-09,4;UBERON:0007240,3.47e-09,4;UBERON:0005742,3.47e-09,4;UBERON:0005734,3.47e-09,4;UBERON:0004664,3.47e-09,4;UBERON:0004663,3.47e-09,4;UBERON:0003104,9.65e-09,160;UBERON:0009142,9.65e-09,160;UBERON:0005933,2.23e-08,2;UBERON:0005942,2.23e-08,2;UBERON:0005932,2.23e-08,2;UBERON:0002199,5.25e-08,46;UBERON:0002416,5.25e-08,46;UBERON:0002097,1.38e-07,41;UBERON:0004573,1.54e-07,33;UBERON:0004571,1.54e-07,33;UBERON:0002100,1.97e-07,199;UBERON:0003834,5.09e-07,5;UBERON:0001533,5.09e-07,5;UBERON:0001637,6.10e-07,42;UBERON:0003509,6.10e-07,42;UBERON:0004572,6.10e-07,42 | |||
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|short_description=p1@ENST00000544557 | |short_description=p1@ENST00000544557 | ||
}} | }} |
Latest revision as of 11:26, 24 July 2015
Short description: | p1@ENST00000544557 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000544557_5end |
Coexpression cluster: | C341_giant_large_Fibroblast_Mesenchymal_Alveolar_Mesothelial_mesothelioma |
Association with transcript: | -67bp_to_ENST00000544557_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of dermis | 9.08e-17 | 6 |
cell of skeletal muscle | 2.13e-15 | 9 |
muscle precursor cell | 1.15e-14 | 58 |
myoblast | 1.15e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.15e-14 | 58 |
light melanocyte | 1.05e-12 | 3 |
skeletal muscle satellite cell | 3.12e-12 | 3 |
hair follicle cell | 4.75e-12 | 5 |
muscle cell | 5.40e-12 | 55 |
electrically responsive cell | 1.74e-10 | 61 |
electrically active cell | 1.74e-10 | 61 |
melanocyte | 1.43e-09 | 10 |
melanoblast | 1.43e-09 | 10 |
fibroblast of tunica adventitia of artery | 3.47e-09 | 4 |
fibroblast of the aortic adventitia | 3.47e-09 | 4 |
embryonic cell | 1.23e-08 | 250 |
outer root sheath cell | 2.23e-08 | 2 |
migratory neural crest cell | 4.58e-07 | 41 |
smooth muscle cell of the subclavian artery | 5.09e-07 | 5 |
pigment cell | 9.67e-07 | 14 |