FFCP PHASE1:Hg19::chr12:70590020..70590050,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:70590020..70590050,+ | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_at_chr12:70590020..70590050,+ | |description=CAGE_peak_at_chr12:70590020..70590050,+ | ||
|id=chr12:70590020..70590050,+ | |id=chr12:70590020..70590050,+ | ||
|ontology_enrichment_celltype=CL:0002586!1.30e-08!3;CL:0000149!9.11e-07!4 | |ontology_enrichment_celltype=CL:0002586!1.30e-08!3;CL:0000149!9.11e-07!4 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.62e-23;3 | |||
|ontology_enrichment_disease=DOID:5409!7.27e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:5409;9.45e-18;4!DOID:1325;9.43e-11;7!DOID:3904;9.43e-11;7!DOID:3905;1.16e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.03e-17,4;DOID:1325,9.89e-11,7;DOID:3904,9.89e-11,7;DOID:3905,1.21e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0000966!1.13e-18!5;UBERON:0005388!1.13e-18!5;UBERON:0001802!1.13e-18!5;UBERON:0000970!1.15e-10!20;UBERON:0002104!3.46e-10!21;UBERON:0000020!2.35e-09!23;UBERON:0001032!5.43e-09!24;UBERON:0004456!5.43e-09!24;UBERON:0001781!1.30e-08!3;UBERON:0001782!1.30e-08!3;UBERON:0005424!1.30e-08!3;UBERON:0000073!3.76e-08!94;UBERON:0001016!3.76e-08!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.40e-14;5!UBERON:0005388;1.40e-14;5!UBERON:0001802;1.40e-14;5!UBERON:0000970;2.49e-14;20!UBERON:0002104;1.05e-13;21!UBERON:0000020;1.29e-12;23!UBERON:0001032;3.86e-12;24!UBERON:0004456;3.86e-12;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.02e-13,21;UBERON:0002104,1.02e-13,21;UBERON:0000966,2.19e-12,6;UBERON:0005388,2.19e-12,6;UBERON:0001802,2.19e-12,6;UBERON:0000020,3.75e-12,24;UBERON:0001032,3.75e-12,24;UBERON:0004456,3.75e-12,24 | |||
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|short_description=p@chr12:70590020..70590050,+ | |short_description=p@chr12:70590020..70590050,+ | ||
}} | }} |
Latest revision as of 12:03, 24 July 2015
Short description: | p@chr12:70590020..70590050, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:70590020..70590050, + |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 1.02e-13 | 21 |
visual system | 1.02e-13 | 21 |
retina | 2.19e-12 | 6 |
photoreceptor array | 2.19e-12 | 6 |
posterior segment of eyeball | 2.19e-12 | 6 |
sense organ | 3.75e-12 | 24 |
sensory system | 3.75e-12 | 24 |
entire sense organ system | 3.75e-12 | 24 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.03e-17 | 4 |
bronchus cancer | 9.89e-11 | 7 |
bronchogenic carcinoma | 9.89e-11 | 7 |
lung carcinoma | 1.21e-08 | 9 |