FFCP PHASE1:Hg19::chr12:7177634..7177646,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:7177634..7177646,+ | |||
|coexpression_cluster_id=C424 | |||
|description=CAGE_peak_at_chr12:7177634..7177646,+ | |description=CAGE_peak_at_chr12:7177634..7177646,+ | ||
|id=chr12:7177634..7177646,+ | |id=chr12:7177634..7177646,+ | ||
|ontology_enrichment_celltype=CL:0000153!4.04e-08!9;CL:0000447!4.04e-08!9;CL:0000055!1.02e-07!180;CL:0000667!4.01e-07!6;CL:0000058!4.01e-07!6;CL:0000138!4.01e-07!6;CL:0000057!4.12e-07!75;CL:0000499!6.72e-07!27;CL:0002334!7.60e-07!12 | |ontology_enrichment_celltype=CL:0000153!4.04e-08!9;CL:0000447!4.04e-08!9;CL:0000055!1.02e-07!180;CL:0000667!4.01e-07!6;CL:0000058!4.01e-07!6;CL:0000138!4.01e-07!6;CL:0000057!4.12e-07!75;CL:0000499!6.72e-07!27;CL:0002334!7.60e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000153;5.68e-21;9!CL:0000447;5.68e-21;9!CL:0000138;3.05e-16;6!CL:0000499;2.85e-15;28!CL:0000135;2.66e-13;3!CL:0000388;2.66e-13;3!CL:0000327;3.52e-12;15!CL:0000136;9.73e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,7.33e-21,9;CL:0000447,7.33e-21,9;CL:0000058,4.11e-16,6;CL:0000138,4.11e-16,6;CL:0000499,3.12e-15,28;CL:0000135,2.33e-13,3;CL:0000388,2.33e-13,3;CL:0000327,4.07e-12,15;CL:0000136,9.74e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004457!4.65e-08!12;UBERON:0000042!4.65e-08!12;UBERON:0002100!8.45e-08!216;UBERON:0005256!1.18e-07!143;UBERON:0004458!2.56e-07!49;UBERON:0003688!4.06e-07!6;UBERON:0002358!4.06e-07!6;UBERON:0003684!4.06e-07!6;UBERON:0001178!4.06e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.66e-13;3!UBERON:0000043;2.66e-13;3!UBERON:0007845;2.66e-13;3!UBERON:0004457;2.34e-11;9!UBERON:0000042;2.34e-11;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.33e-13,3;UBERON:0000043,2.33e-13,3;UBERON:0007845,2.33e-13,3;UBERON:0004457,1.95e-08,12;UBERON:0000042,1.95e-08,12 | |||
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| ||
|short_description=p@chr12:7177634..7177646,+ | |short_description=p@chr12:7177634..7177646,+ | ||
}} | }} |
Latest revision as of 12:12, 24 July 2015
Short description: | p@chr12:7177634..7177646, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:7177634..7177646, + |
Coexpression cluster: | C424_Hepatocyte_liver_Synoviocyte_tenocyte_Fibroblast_Adipocyte_Cardiac |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 7.33e-21 | 9 |
carbohydrate secreting cell | 7.33e-21 | 9 |
chondroblast | 4.11e-16 | 6 |
chondrocyte | 4.11e-16 | 6 |
stromal cell | 3.12e-15 | 28 |
fibrocyte | 2.33e-13 | 3 |
tendon cell | 2.33e-13 | 3 |
extracellular matrix secreting cell | 4.07e-12 | 15 |
fat cell | 9.74e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 2.33e-13 | 3 |
tendon | 2.33e-13 | 3 |
regular connective tissue | 2.33e-13 | 3 |
cavity lining | 1.95e-08 | 12 |
serous membrane | 1.95e-08 | 12 |