FFCP PHASE1:Hg19::chr12:79270262..79270266,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:79270262..79270266,+ | |||
|coexpression_cluster_id=C1177 | |||
|description=CAGE_peak_at_chr12:79270262..79270266,+ | |description=CAGE_peak_at_chr12:79270262..79270266,+ | ||
|id=chr12:79270262..79270266,+ | |id=chr12:79270262..79270266,+ | ||
|ontology_enrichment_celltype=CL:0002319!1.45e-07!25 | |ontology_enrichment_celltype=CL:0002319!1.45e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000064;9.23e-20;3!CL:0000067;9.23e-20;3!CL:0005012;9.23e-20;3!CL:0002304;9.23e-20;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.32e-19,3;CL:0000067,1.32e-19,3;CL:0005012,1.32e-19,3;CL:0002304,1.32e-19,3;CL:0000133,4.01e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.28e-10;3!UBERON:0003056;1.78e-09;3!UBERON:0005425;1.00e-07;1 | |||
|ontology_enrichment_disease=DOID:171!1.25e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:5409;9.72e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.01e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000073!6.79e-36!94;UBERON:0001016!6.79e-36!94;UBERON:0005743!5.09e-30!86;UBERON:0001017!1.12e-29!82;UBERON:0000955!1.57e-26!69;UBERON:0006238!1.57e-26!69;UBERON:0001869!4.67e-26!32;UBERON:0002616!8.60e-26!59;UBERON:0001049!2.68e-25!57;UBERON:0005068!2.68e-25!57;UBERON:0006241!2.68e-25!57;UBERON:0007135!2.68e-25!57;UBERON:0002780!9.92e-25!41;UBERON:0001890!9.92e-25!41;UBERON:0006240!9.92e-25!41;UBERON:0001893!5.34e-24!34;UBERON:0003080!6.77e-24!42;UBERON:0002020!1.32e-23!34;UBERON:0003528!1.32e-23!34;UBERON:0002346!3.31e-23!90;UBERON:0002791!6.35e-23!33;UBERON:0002619!2.82e-22!22;UBERON:0003056!3.87e-21!61;UBERON:0000956!6.31e-21!25;UBERON:0000203!6.31e-21!25;UBERON:0000924!6.95e-21!173;UBERON:0006601!6.95e-21!173;UBERON:0003075!2.86e-20!86;UBERON:0007284!2.86e-20!86;UBERON:0001950!5.28e-20!20;UBERON:0004121!1.61e-18!169;UBERON:0000033!1.01e-16!123;UBERON:0000153!3.35e-15!129;UBERON:0007811!3.35e-15!129;UBERON:0007023!1.37e-08!115;UBERON:0000200!1.50e-08!6;UBERON:0000025!5.24e-08!194;UBERON:0000010!2.81e-07!8;UBERON:0000483!3.06e-07!309;UBERON:0001872!3.54e-07!5;UBERON:0000477!4.98e-07!286;UBERON:0000119!5.42e-07!312;UBERON:0002021!5.96e-07!5;UBERON:0004111!7.70e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;9.23e-20;3!UBERON:0001775;9.23e-20;3!UBERON:0000488;5.70e-15;4!UBERON:0002021;2.45e-12;5!UBERON:0000010;1.45e-11;8!UBERON:0002203;3.71e-10;6!UBERON:0001768;3.71e-10;6!UBERON:0002200;3.71e-10;6!UBERON:0002619;8.34e-10;22!UBERON:0002791;2.31e-09;32!UBERON:0001869;2.31e-09;32!UBERON:0000956;1.31e-08;25!UBERON:0000203;1.31e-08;25!UBERON:0001016;2.05e-08;83!UBERON:0000941;1.00e-07;1!UBERON:0001785;1.00e-07;1!UBERON:0002464;1.00e-07;1!UBERON:0004904;1.00e-07;1!UBERON:0001021;1.00e-07;1!UBERON:0001950;1.28e-07;20!UBERON:0002104;1.97e-07;21!UBERON:0001893;2.03e-07;34!UBERON:0003528;4.08e-07;34!UBERON:0002020;4.08e-07;34!UBERON:0002780;6.75e-07;41!UBERON:0001890;6.75e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.32e-19,3;UBERON:0001775,1.32e-19,3;UBERON:0001016,6.68e-15,89;UBERON:0000488,7.46e-15,4;UBERON:0002346,8.17e-14,86;UBERON:0003056,9.57e-13,61;UBERON:0003075,1.56e-12,82;UBERON:0007284,1.56e-12,82;UBERON:0002021,2.51e-12,5;UBERON:0000010,1.10e-11,8;UBERON:0004121,6.25e-11,171;UBERON:0000924,6.25e-11,171;UBERON:0006601,6.25e-11,171;UBERON:0002203,4.43e-10,6;UBERON:0001768,4.43e-10,6;UBERON:0002200,4.43e-10,6;UBERON:0002619,9.66e-10,22;UBERON:0000955,2.36e-09,68;UBERON:0006238,2.36e-09,68;UBERON:0010371,2.44e-09,104;UBERON:0001017,4.19e-09,81;UBERON:0002791,6.68e-09,32;UBERON:0001869,6.68e-09,32;UBERON:0000956,1.49e-08,25;UBERON:0000203,1.49e-08,25;UBERON:0000073,2.10e-08,53;UBERON:0002616,2.10e-08,53;UBERON:0003528,2.41e-08,34;UBERON:0002020,2.41e-08,34;UBERON:0001893,2.41e-08,34;UBERON:0001049,6.92e-08,56;UBERON:0005068,6.92e-08,56;UBERON:0006241,6.92e-08,56;UBERON:0007135,6.92e-08,56;UBERON:0000941,7.45e-08,1;UBERON:0001785,7.45e-08,1;UBERON:0002464,7.45e-08,1;UBERON:0004904,7.45e-08,1;UBERON:0001021,7.45e-08,1;UBERON:0003902,7.45e-08,1;UBERON:0005425,7.45e-08,1;UBERON:0000019,8.24e-08,20;UBERON:0000047,8.24e-08,20;UBERON:0010312,8.24e-08,20;UBERON:0004088,8.24e-08,20;UBERON:0010230,8.24e-08,20;UBERON:0003072,8.24e-08,20;UBERON:0004128,8.24e-08,20;UBERON:0003071,8.24e-08,20;UBERON:0001950,1.49e-07,20;UBERON:0011216,1.76e-07,223;UBERON:0000970,1.99e-07,21;UBERON:0002104,1.99e-07,21;UBERON:0001456,4.43e-07,22;UBERON:0010314,8.16e-07,132;UBERON:0002780,8.24e-07,41;UBERON:0001890,8.24e-07,41;UBERON:0003080,8.24e-07,41;UBERON:0006240,8.24e-07,41 | |||
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|short_description=p@chr12:79270262..79270266,+ | |short_description=p@chr12:79270262..79270266,+ | ||
}} | }} |
Latest revision as of 12:36, 24 July 2015
Short description: | p@chr12:79270262..79270266, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:79270262..79270266, + |
Coexpression cluster: | C1177_medulloblastoma_cerebellum_parietal_occipital_middle_neuroectodermal_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.32e-19 | 3 |
ciliated epithelial cell | 1.32e-19 | 3 |
multi-ciliated epithelial cell | 1.32e-19 | 3 |
non-pigmented ciliary epithelial cell | 1.32e-19 | 3 |
neurectodermal cell | 4.01e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.01e-07 | 4 |