FFCP PHASE1:Hg19::chr12:81273421..81273425,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:81273421..81273425,- | |||
|coexpression_cluster_id=C2243 | |coexpression_cluster_id=C2243 | ||
|description=CAGE_peak_at_chr12:81273421..81273425,- | |description=CAGE_peak_at_chr12:81273421..81273425,- | ||
|id=chr12:81273421..81273425,- | |id=chr12:81273421..81273425,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002619;1.29e-18;22!UBERON:0001950;1.10e-16;20!UBERON:0000956;2.99e-16;25!UBERON:0000203;2.99e-16;25!UBERON:0002791;8.48e-11;32!UBERON:0001869;1.06e-10;32!UBERON:0001876;3.32e-10;2!UBERON:0003528;2.44e-09;34!UBERON:0002020;2.44e-09;34!UBERON:0002021;2.46e-09;5!UBERON:0001893;4.62e-09;34!UBERON:0000349;7.27e-09;5!UBERON:0002780;7.72e-09;41!UBERON:0001890;7.72e-09;41 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.45e-20!115;UBERON:0001049!1.72e-19!57;UBERON:0005068!1.72e-19!57;UBERON:0006241!1.72e-19!57;UBERON:0007135!1.72e-19!57;UBERON:0002780!8.80e-19!41;UBERON:0001890!8.80e-19!41;UBERON:0006240!8.80e-19!41;UBERON:0002616!1.75e-18!59;UBERON:0002346!4.69e-18!90;UBERON:0003080!4.78e-18!42;UBERON:0000955!8.26e-16!69;UBERON:0006238!8.26e-16!69;UBERON:0001869!1.33e-15!32;UBERON:0003075!1.42e-15!86;UBERON:0007284!1.42e-15!86;UBERON:0001017!2.42e-15!82;UBERON:0001893!3.85e-15!34;UBERON:0002020!3.95e-15!34;UBERON:0003528!3.95e-15!34;UBERON:0000073!9.43e-15!94;UBERON:0001016!9.43e-15!94;UBERON:0002791!1.21e-14!33;UBERON:0005743!1.37e-14!86;UBERON:0000956!2.30e-14!25;UBERON:0000203!2.30e-14!25;UBERON:0003056!6.70e-13!61;UBERON:0002619!1.63e-12!22;UBERON:0001950!7.59e-11!20;UBERON:0000033!1.23e-10!123;UBERON:0000153!2.29e-09!129;UBERON:0007811!2.29e-09!129;UBERON:0000924!2.60e-09!173;UBERON:0006601!2.60e-09!173;UBERON:0004121!7.72e-08!169;UBERON:0000178!4.73e-07!15;UBERON:0000179!4.73e-07!15;UBERON:0000463!4.73e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.29e-18;22!UBERON:0001950;1.10e-16;20!UBERON:0000956;2.99e-16;25!UBERON:0000203;2.99e-16;25!UBERON:0002791;8.48e-11;32!UBERON:0001869;1.06e-10;32!UBERON:0001876;3.32e-10;2!UBERON:0003528;2.44e-09;34!UBERON:0002020;2.44e-09;34!UBERON:0002021;2.46e-09;5!UBERON:0001893;4.62e-09;34!UBERON:0000349;7.27e-09;5!UBERON:0002780;7.72e-09;41!UBERON:0001890;7.72e-09;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.26e-18,22;UBERON:0001950,1.15e-16,20;UBERON:0000956,2.94e-16,25;UBERON:0000203,2.94e-16,25;UBERON:0002791,2.08e-12,32;UBERON:0001869,2.08e-12,32;UBERON:0003528,1.36e-11,34;UBERON:0002020,1.36e-11,34;UBERON:0001893,1.36e-11,34;UBERON:0002780,1.77e-11,41;UBERON:0001890,1.77e-11,41;UBERON:0003080,1.77e-11,41;UBERON:0006240,1.77e-11,41;UBERON:0001876,1.06e-10,2;UBERON:0000073,3.11e-10,53;UBERON:0002616,3.11e-10,53;UBERON:0001049,1.44e-09,56;UBERON:0005068,1.44e-09,56;UBERON:0006241,1.44e-09,56;UBERON:0007135,1.44e-09,56;UBERON:0002021,2.97e-09,5;UBERON:0000349,3.41e-09,5;UBERON:0003056,1.55e-08,61;UBERON:0001016,2.83e-08,89;UBERON:0002346,9.56e-08,86;UBERON:0000955,2.38e-07,68;UBERON:0006238,2.38e-07,68;UBERON:0003075,5.83e-07,82;UBERON:0007284,5.83e-07,82;UBERON:0001017,6.05e-07,81 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408001382488506,0,0.572471974262113,0.410623275218653,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.434021741431704,0.223915474239924,0,0.257575567634187,0.436194716338694,0.377875943688809,0.242584061187816,1.16214518452842,0,0,0.28769239232215,0,0,0.689491361473237,0,0,0.376484679085209,0,0,0,0.320929027076094,0,0.329851300186716,0,0,0.290209238628584,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0.425208599930087,0,0.22465726229299,0,0.32145117339416,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.196468613246569,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0.44905874525234,0,0,0,0,1.31780417436063,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0.23486899728753,0.161872944368132,0.280901613404497,0.816616685019573,0.122834317311768,0.309977343527296,0,0,0,0,0.168336113954066,0.500474079487857,0.277064115484183,0,0,0,0.113432183160021,0.358779271377724,0,0,0,0.206105058476878,0.515281080091258,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0.355009592516614,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0,0,2.18986415445498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0.491953754172454,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0.508189248444927,1.30139853857622,0,0,0,0.749007023947182,0,2.48649308061621,0.12269149171914,0,0.271265023699736,0,0,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0.164254312027618,0,0.116210378459959,1.20859449591622,0,0,0.114814448164607,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.515205058238611,0,0,0,0,0,0.096670718292122,0,0.614014698904518,0.137836572484531,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0.316379424718726,0,0,0.42793898803392,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,1.41215701165169,0,0,0,0,1.01489521846434,1.52927441428475,0.569647187174163,0.476463550915578,2.05681136543097,1.29694662238543,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0.94007937463814,0,0,0,0,0,0,0.307240764308458,1.11838053946208,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,1.54736358051564,0,0,0,0,0,0.251932747854276,0,1.84627208191604,0,0,0,0,0,0,2.22273980289274,0,0.185536196323703,0,1.04171104434093,0,0,0,0,0,1.03423011972439,1.16641845353302,0.173624994933292,0,0.964771509003264,0,4.09143261745531,0.886642856860642,0.87754158861589,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0.627921025580099,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.176915129006678,1.83309043480088,0.296521128680622,0.494255755786011,0.104421949505455,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.505492637027904,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.473296469895,0.677942222341597,0,0.19871461170299,0.886351143382302,0,0,0,0,0,0.458146384663663,1.37275998289572,0,0,0,0,0.209205692624666,0,0,0,0.273810757783986,0,0,0.262887354279314,0.279282401272254,0.687481272035051,0,0,0,0.223171457441873,0.671834724867263,0,0,0.551482276150566,0.164831716762333,0.337017719270924,0.295282444544246,0.338693328263138,0.795229689809303,1.36203406111576,0,0,0,0,0,0.303747783290123,0,0.551639951094387,0.0524545881349981,0,0.717149357331379,0,0,0.662091970365432,0,0,0,0,0,0,0.340776043570843,0,0.293104467356165,0,0.129282956361551,0.26446520348538,0,0,0.106787412567695,0.157204305099666,0,0.992332043623902,0,0,0,0,0,0,0.327872630709804,2.82697373250422,0,0.976210119215705,1.001527445652,0,0.776503360757966,0.248385611765534,0.415045904808692,0,0,0,0,0.468334905806882,0.28984205722165,0.149254802886874,0,0,0,0.251567901752575,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,1.24432592536558,0,0,0,0,0,0,0.39997479170986,1.60037594541211,0,0,0,0,0.622077260032973,1.27894371303652,0.215649622793364,0,0.109209638192014,0.33946505990805,6.1646726829488,0.991486114072017,0,0,0,0,0,0,0.256916900385838,0,2.23487402680012,2.05116364240755,1.26035848110859,0.207471757392654,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.270150338473579,0,1.2401207790071,0.380494861163441,2.7348740450911,0,1.98484471355718,0.527613733078862,0.255524855279191,0,4.03540466662589,0.606965604236632,0.91064876540519,0.354809480650555,1.03710588800201,0,0.543757863814654,0.197318320688547,0,0,0,0.314231179832004,0,0,0,0,0.214429632529969,0,0.116241425368125,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,2.2589216407792,0.329821550236287,0,0,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0,0,0,0.187967835959707,0,0,0,0,0,1.46067277649303,0.458729283404541,0,0,0.271965960763659,1.30905207102113,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.517164979309476,0,0,0,0,0.112131862580613,0.0636471582781649,0.808468755832877,0.217716747896961,0,0,0.215166616178029,0,0,0,0,0,0,0.244482888365733,1.22068853494722,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408001382488506,0,0.572471974262113,0.410623275218653,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.434021741431704,0.223915474239924,0,0.257575567634187,0.436194716338694,0.377875943688809,0.242584061187816,1.16214518452842,0,0,0.28769239232215,0,0,0.689491361473237,0,0,0.376484679085209,0,0,0,0.320929027076094,0,0.329851300186716,0,0,0.290209238628584,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0.425208599930087,0,0.22465726229299,0,0.32145117339416,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.196468613246569,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0.44905874525234,0,0,0,0,1.31780417436063,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0.23486899728753,0.161872944368132,0.280901613404497,0.816616685019573,0.122834317311768,0.309977343527296,0,0,0,0,0.168336113954066,0.500474079487857,0.277064115484183,0,0,0,0.113432183160021,0.358779271377724,0,0,0,0.206105058476878,0.515281080091258,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0.355009592516614,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0,0,2.18986415445498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0.491953754172454,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0.508189248444927,1.30139853857622,0,0,0,0.749007023947182,0,2.48649308061621,0.12269149171914,0,0.271265023699736,0,0,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0.164254312027618,0,0.116210378459959,1.20859449591622,0,0,0.114814448164607,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.515205058238611,0,0,0,0,0,0.096670718292122,0,0.614014698904518,0.137836572484531,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0.316379424718726,0,0,0.42793898803392,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,1.41215701165169,0,0,0,0,1.01489521846434,1.52927441428475,0.569647187174163,0.476463550915578,2.05681136543097,1.29694662238543,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0.94007937463814,0,0,0,0,0,0,0.307240764308458,1.11838053946208,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,1.54736358051564,0,0,0,0,0,0.251932747854276,0,1.84627208191604,0,0,0,0,0,0,2.22273980289274,0,0.185536196323703,0,1.04171104434093,0,0,0,0,0,1.03423011972439,1.16641845353302,0.173624994933292,0,0.964771509003264,0,4.09143261745531,0.886642856860642,0.87754158861589,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0.627921025580099,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.176915129006678,1.83309043480088,0.296521128680622,0.494255755786011,0.104421949505455,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.505492637027904,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.473296469895,0.677942222341597,0,0.19871461170299,0.886351143382302,0,0,0,0,0,0.458146384663663,1.37275998289572,0,0,0,0,0.209205692624666,0,0,0,0.273810757783986,0,0,0.262887354279314,0.279282401272254,0.687481272035051,0,0,0,0.223171457441873,0.671834724867263,0,0,0.551482276150566,0.164831716762333,0.337017719270924,0.295282444544246,0.338693328263138,0.795229689809303,1.36203406111576,0,0,0,0,0,0.303747783290123,0,0.551639951094387,0.0524545881349981,0,0.717149357331379,0,0,0.662091970365432,0,0,0,0,0,0,0.340776043570843,0,0.293104467356165,0,0.129282956361551,0.26446520348538,0,0,0.106787412567695,0.157204305099666,0,0.992332043623902,0,0,0,0,0,0,0.327872630709804,2.82697373250422,0,0.976210119215705,1.001527445652,0,0.776503360757966,0.248385611765534,0.415045904808692,0,0,0,0,0.468334905806882,0.28984205722165,0.149254802886874,0,0,0,0.251567901752575,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,1.24432592536558,0,0,0,0,0,0,0.39997479170986,1.60037594541211,0,0,0,0,0.622077260032973,1.27894371303652,0.215649622793364,0,0.109209638192014,0.33946505990805,6.1646726829488,0.991486114072017,0,0,0,0,0,0,0.256916900385838,0,2.23487402680012,2.05116364240755,1.26035848110859,0.207471757392654,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.270150338473579,0,1.2401207790071,0.380494861163441,2.7348740450911,0,1.98484471355718,0.527613733078862,0.255524855279191,0,4.03540466662589,0.606965604236632,0.91064876540519,0.354809480650555,1.03710588800201,0,0.543757863814654,0.197318320688547,0,0,0,0.314231179832004,0,0,0,0,0.214429632529969,0,0.116241425368125,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,2.2589216407792,0.329821550236287,0,0,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0,0,0,0.187967835959707,0,0,0,0,0,1.46067277649303,0.458729283404541,0,0,0.271965960763659,1.30905207102113,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.517164979309476,0,0,0,0,0.112131862580613,0.0636471582781649,0.808468755832877,0.217716747896961,0,0,0.215166616178029,0,0,0,0,0,0,0.244482888365733,1.22068853494722,0,0,0.320568492303233 | ||
|short_description=p@chr12:81273421..81273425,- | |short_description=p@chr12:81273421..81273425,- | ||
}} | }} |
Latest revision as of 12:49, 24 July 2015
Short description: | p@chr12:81273421..81273425, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:81273421..81273425, - |
Coexpression cluster: | C2243_extraskeletal_pineal_Neutrophils_cerebellum_small_large_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 1.26e-18 | 22 |
neocortex | 1.15e-16 | 20 |
cerebral cortex | 2.94e-16 | 25 |
pallium | 2.94e-16 | 25 |
regional part of telencephalon | 2.08e-12 | 32 |
cerebral hemisphere | 2.08e-12 | 32 |
brain grey matter | 1.36e-11 | 34 |
gray matter | 1.36e-11 | 34 |
telencephalon | 1.36e-11 | 34 |
regional part of forebrain | 1.77e-11 | 41 |
forebrain | 1.77e-11 | 41 |
anterior neural tube | 1.77e-11 | 41 |
future forebrain | 1.77e-11 | 41 |
amygdala | 1.06e-10 | 2 |
regional part of nervous system | 3.11e-10 | 53 |
regional part of brain | 3.11e-10 | 53 |
neural tube | 1.44e-09 | 56 |
neural rod | 1.44e-09 | 56 |
future spinal cord | 1.44e-09 | 56 |
neural keel | 1.44e-09 | 56 |
occipital lobe | 2.97e-09 | 5 |
limbic system | 3.41e-09 | 5 |
pre-chordal neural plate | 1.55e-08 | 61 |
nervous system | 2.83e-08 | 89 |
neurectoderm | 9.56e-08 | 86 |
brain | 2.38e-07 | 68 |
future brain | 2.38e-07 | 68 |
neural plate | 5.83e-07 | 82 |
presumptive neural plate | 5.83e-07 | 82 |
central nervous system | 6.05e-07 | 81 |