FFCP PHASE1:Hg19::chr12:9067059..9067109,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=1911 | |EntrezGene=entrezgene:1911 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=3182 | |HGNC=HGNC:3182 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-39bp_to_ENST00000543824_5end | |association_with_transcript=-39bp_to_ENST00000543824_5end | ||
|cluster_id=chr12:9067059..9067109,+ | |||
|description=CAGE_peak_2_at_PHC1_5end | |description=CAGE_peak_2_at_PHC1_5end | ||
|id=chr12:9067059..9067109,+ | |id=chr12:9067059..9067109,+ |
Revision as of 13:25, 24 July 2015
Short description: | p2@PHC1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PHC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -39bp_to_ENST00000543824_5end |
EntrezGene: | 1911 |
HGNC: | 3182 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@PHC1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 5.85e-24 | 89 |
neural tube | 7.75e-22 | 56 |
neural rod | 7.75e-22 | 56 |
future spinal cord | 7.75e-22 | 56 |
neural keel | 7.75e-22 | 56 |
central nervous system | 1.46e-21 | 81 |
neurectoderm | 2.18e-20 | 86 |
regional part of nervous system | 2.80e-20 | 53 |
regional part of brain | 2.80e-20 | 53 |
neural plate | 4.60e-19 | 82 |
Showing 1 to 10 of 37 entries
Ontology term | p-value | n |
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germ cell and embryonal cancer | 2.25e-11 | 22 |
germ cell cancer | 2.25e-11 | 22 |
Showing 1 to 2 of 2 entries