FFCP PHASE1:Hg19::chr12:94634092..94634130,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:94634092..94634130,+
|short_description=p@chr12:94634092..94634130,+
|description=CAGE_peak_at_chr12:94634092..94634130,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:94634092..94634130,+ | |||
|coexpression_cluster_id=C1183 | |||
|description=CAGE_peak_at_chr12:94634092..94634130,+ | |||
|id=chr12:94634092..94634130,+ | |||
|ontology_enrichment_celltype=CL:0000945!6.67e-39!24;CL:0000826!6.67e-39!24;CL:0002087!5.57e-26!119;CL:0002031!8.76e-23!124;CL:0002032!9.03e-23!165;CL:0000837!9.03e-23!165;CL:0000738!1.01e-22!140;CL:0000037!1.55e-21!172;CL:0000566!1.55e-21!172;CL:0000542!2.61e-20!53;CL:0000051!2.61e-20!53;CL:0000988!6.15e-20!182;CL:0000236!1.94e-19!14;CL:0000838!2.81e-18!52;CL:0002393!2.33e-17!9;CL:0002397!2.33e-17!9;CL:0000875!3.02e-14!3;CL:0002396!3.02e-14!3;CL:0002057!2.77e-12!42;CL:0000860!2.67e-11!45;CL:0002194!1.43e-08!63;CL:0000576!1.43e-08!63;CL:0000040!1.43e-08!63;CL:0000559!1.43e-08!63;CL:0002009!3.12e-08!65;CL:0000839!1.81e-07!70;CL:0000557!2.50e-07!71;CL:0000763!4.84e-07!112;CL:0000049!4.84e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.48e-34;24!CL:0000236;3.94e-11;13!CL:0000542;5.10e-10;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.48e-34,24;CL:0000826,1.48e-34,24;CL:0000838,2.78e-16,52;CL:0000542,5.50e-16,53;CL:0000051,5.50e-16,53;CL:0000236,1.99e-10,14;CL:0002087,1.55e-07,115;CL:0002031,3.07e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;5.10e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;5.97e-34;1!DOID:0050177;5.97e-34;1!DOID:0050427;5.97e-34;1!DOID:0060058;2.49e-14;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,5.05e-34,1;DOID:0050177,5.05e-34,1;DOID:0050427,5.05e-34,1;DOID:0060058,2.49e-14,10 | |||
|ontology_enrichment_uberon=UBERON:0002193!2.45e-09!112;UBERON:0002390!2.97e-08!102;UBERON:0003061!2.97e-08!102;UBERON:0002405!7.89e-07!115;UBERON:0002106!8.76e-07!3;UBERON:0004854!8.76e-07!3;UBERON:0009034!8.76e-07!3;UBERON:0002095!8.76e-07!3;UBERON:0004782!8.76e-07!3;UBERON:0003281!8.76e-07!3;UBERON:0009664!8.76e-07!3;UBERON:0002296!8.76e-07!3;UBERON:0005602!8.76e-07!3;UBERON:0001179!8.76e-07!3;UBERON:0006293!8.76e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.85e-12;3!UBERON:0004177;5.35e-08;5!UBERON:0005057;5.35e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.85e-12,3;UBERON:0004854,1.85e-12,3;UBERON:0009034,1.85e-12,3;UBERON:0002095,1.85e-12,3;UBERON:0004782,1.85e-12,3;UBERON:0003281,1.85e-12,3;UBERON:0009664,1.85e-12,3;UBERON:0002296,1.85e-12,3;UBERON:0005602,1.85e-12,3;UBERON:0001179,1.85e-12,3;UBERON:0006293,1.85e-12,3 | |||
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| ||
|short_description=p@chr12:94634092..94634130,+ | |||
}} | }} |
Latest revision as of 13:45, 24 July 2015
Short description: | p@chr12:94634092..94634130, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:94634092..94634130, + |
Coexpression cluster: | C1183_splenic_CD19_Burkitt_acute_xeroderma_B_appendix |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.48e-34 | 24 |
pro-B cell | 1.48e-34 | 24 |
lymphoid lineage restricted progenitor cell | 2.78e-16 | 52 |
lymphocyte | 5.50e-16 | 53 |
common lymphoid progenitor | 5.50e-16 | 53 |
B cell | 1.99e-10 | 14 |
nongranular leukocyte | 1.55e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 3.07e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.85e-12 | 3 |
gastrointestinal system mesentery | 1.85e-12 | 3 |
stomach region | 1.85e-12 | 3 |
mesentery | 1.85e-12 | 3 |
gastrointestinal system serosa | 1.85e-12 | 3 |
mesentery of stomach | 1.85e-12 | 3 |
gut mesentery | 1.85e-12 | 3 |
dorsal mesentery | 1.85e-12 | 3 |
dorsal mesogastrium | 1.85e-12 | 3 |
peritoneal cavity | 1.85e-12 | 3 |
spleen primordium | 1.85e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 5.05e-34 | 1 |
monogenic disease | 5.05e-34 | 1 |
xeroderma pigmentosum | 5.05e-34 | 1 |
lymphoma | 2.49e-14 | 10 |