FFCP PHASE1:Hg19::chr13:100622472..100622484,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:100622472..100622484,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_at_chr13:100622472..100622484,- | |description=CAGE_peak_at_chr13:100622472..100622484,- | ||
|id=chr13:100622472..100622484,- | |id=chr13:100622472..100622484,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.15e-146;3!UBERON:0010115;1.88e-50;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.58e-23!90;UBERON:0005743!2.27e-22!86;UBERON:0001017!6.76e-22!82;UBERON:0003075!7.38e-21!86;UBERON:0007284!7.38e-21!86;UBERON:0001049!5.01e-20!57;UBERON:0005068!5.01e-20!57;UBERON:0006241!5.01e-20!57;UBERON:0007135!5.01e-20!57;UBERON:0000073!1.38e-19!94;UBERON:0001016!1.38e-19!94;UBERON:0003076!2.79e-16!15;UBERON:0003057!2.79e-16!15;UBERON:0000924!6.60e-15!173;UBERON:0006601!6.60e-15!173;UBERON:0000955!1.10e-13!69;UBERON:0006238!1.10e-13!69;UBERON:0002616!1.68e-13!59;UBERON:0004121!2.85e-13!169;UBERON:0000033!4.95e-12!123;UBERON:0000153!3.61e-11!129;UBERON:0007811!3.61e-11!129;UBERON:0002240!8.05e-11!3;UBERON:0003056!7.04e-10!61;UBERON:0001893!1.79e-09!34;UBERON:0004733!2.88e-09!12;UBERON:0002028!2.88e-09!12;UBERON:0007277!2.88e-09!12;UBERON:0002780!5.75e-09!41;UBERON:0001890!5.75e-09!41;UBERON:0006240!5.75e-09!41;UBERON:0003080!1.08e-08!42;UBERON:0007023!1.65e-08!115;UBERON:0004732!1.70e-08!13;UBERON:0002791!4.09e-08!33;UBERON:0002360!5.12e-08!2;UBERON:0000094!5.12e-08!2;UBERON:0007645!5.12e-08!2;UBERON:0001869!5.27e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;4.83e-74;6!UBERON:0002363;1.88e-50;1!UBERON:0002680;8.50e-50;9!UBERON:0001895;8.50e-50;9!UBERON:0004733;1.18e-37;12!UBERON:0002028;1.18e-37;12!UBERON:0004732;7.52e-35;13!UBERON:0002360;4.90e-26;2!UBERON:0000094;4.90e-26;2!UBERON:0010743;4.90e-26;2!UBERON:0001016;5.91e-09;83!UBERON:0000073;8.14e-07;53!UBERON:0002616;8.14e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,5.47e-74,6;UBERON:0006215,5.47e-74,6;UBERON:0002363,1.46e-50,1;UBERON:0007645,1.46e-50,1;UBERON:0007647,1.46e-50,1;UBERON:0010115,1.46e-50,1;UBERON:0002680,9.25e-50,9;UBERON:0001895,9.25e-50,9;UBERON:0010092,9.25e-50,9;UBERON:0004733,1.26e-37,12;UBERON:0002028,1.26e-37,12;UBERON:0007277,1.26e-37,12;UBERON:0004732,7.97e-35,13;UBERON:0003076,2.45e-30,15;UBERON:0003057,2.45e-30,15;UBERON:0002360,4.32e-26,2;UBERON:0000094,4.32e-26,2;UBERON:0010743,4.32e-26,2;UBERON:0001017,2.17e-10,81;UBERON:0001016,1.88e-09,89;UBERON:0000073,3.93e-09,53;UBERON:0002616,3.93e-09,53;UBERON:0001049,1.07e-08,56;UBERON:0005068,1.07e-08,56;UBERON:0006241,1.07e-08,56;UBERON:0007135,1.07e-08,56;UBERON:0007023,8.86e-08,114;UBERON:0000955,3.10e-07,68;UBERON:0006238,3.10e-07,68;UBERON:0010314,8.99e-07,132 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,1.54810963903714,2.36438095162838,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,2.65383634439649,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0.617792886840502,0.451961481561065,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0.124252535565433,0,0,0,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0.0984274815147488,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0.554645257684261,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0.371807292777007,0,0,0.0788617450012534,0,0,0,0.128458450192919,0,0,0,0,0.0691572524642179,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.202612753855184,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0.214429632529969,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.594092800654172,0.8453114551668,0,0,0,0,0.178553938605658,0,0,0,0,0.143339583151451,0.157771562193185,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0.359300808426348,0,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,1.54810963903714,2.36438095162838,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,2.65383634439649,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0.617792886840502,0.451961481561065,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0.124252535565433,0,0,0,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0.0984274815147488,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0.554645257684261,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0.371807292777007,0,0,0.0788617450012534,0,0,0,0.128458450192919,0,0,0,0,0.0691572524642179,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.202612753855184,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0.214429632529969,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.594092800654172,0.8453114551668,0,0,0,0,0.178553938605658,0,0,0,0,0.143339583151451,0.157771562193185,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0.359300808426348,0,0,0,0,0,0 | ||
|short_description=p@chr13:100622472..100622484,- | |short_description=p@chr13:100622472..100622484,- | ||
}} | }} |
Latest revision as of 14:10, 24 July 2015
Short description: | p@chr13:100622472..100622484, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:100622472..100622484, - |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 5.47e-74 | 6 |
rhombic lip | 5.47e-74 | 6 |
dura mater | 1.46e-50 | 1 |
future meninx | 1.46e-50 | 1 |
ectomeninx | 1.46e-50 | 1 |
future dura mater | 1.46e-50 | 1 |
regional part of metencephalon | 9.25e-50 | 9 |
metencephalon | 9.25e-50 | 9 |
future metencephalon | 9.25e-50 | 9 |
segmental subdivision of hindbrain | 1.26e-37 | 12 |
hindbrain | 1.26e-37 | 12 |
presumptive hindbrain | 1.26e-37 | 12 |
segmental subdivision of nervous system | 7.97e-35 | 13 |
posterior neural tube | 2.45e-30 | 15 |
chordal neural plate | 2.45e-30 | 15 |
meninx | 4.32e-26 | 2 |
membrane organ | 4.32e-26 | 2 |
meningeal cluster | 4.32e-26 | 2 |
central nervous system | 2.17e-10 | 81 |
nervous system | 1.88e-09 | 89 |
regional part of nervous system | 3.93e-09 | 53 |
regional part of brain | 3.93e-09 | 53 |
neural tube | 1.07e-08 | 56 |
neural rod | 1.07e-08 | 56 |
future spinal cord | 1.07e-08 | 56 |
neural keel | 1.07e-08 | 56 |
adult organism | 8.86e-08 | 114 |
brain | 3.10e-07 | 68 |
future brain | 3.10e-07 | 68 |
structure with developmental contribution from neural crest | 8.99e-07 | 132 |