FFCP PHASE1:Hg19::chr13:102379103..102379108,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:102379103..102379108,- | |||
|coexpression_cluster_id=C1358 | |||
|description=CAGE_peak_at_chr13:102379103..102379108,- | |description=CAGE_peak_at_chr13:102379103..102379108,- | ||
|id=chr13:102379103..102379108,- | |id=chr13:102379103..102379108,- | ||
|ontology_enrichment_celltype=CL:0005020!3.96e-14!6;CL:0002138!3.96e-14!6;CL:0005022!3.96e-14!6;CL:0002144!4.09e-13!3;CL:0002139!2.74e-09!24;CL:0002078!6.76e-07!44 | |ontology_enrichment_celltype=CL:0005020!3.96e-14!6;CL:0002138!3.96e-14!6;CL:0005022!3.96e-14!6;CL:0002144!4.09e-13!3;CL:0002139!2.74e-09!24;CL:0002078!6.76e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0002144;9.74e-88;3!CL:0002139;1.16e-25;24!CL:0000071;9.05e-16;18!CL:0002078;2.86e-14;45!CL:0002138;2.45e-12;6!CL:0000115;1.42e-10;36!CL:0000213;7.55e-09;58!CL:0000215;7.55e-09;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,9.74e-88,3;CL:0002139,1.16e-25,24;CL:0000115,1.62e-17,36;CL:0000071,9.05e-16,18;CL:0002546,9.05e-16,18;CL:0002078,3.03e-14,45;CL:0005020,2.45e-12,6;CL:0002138,2.45e-12,6;CL:0005022,2.45e-12,6;CL:0000213,2.67e-11,58;CL:0000215,2.67e-11,58 | |||
|ontology_enrichment_development_v019=CL:0002546;9.05e-16;18!CL:0005022;2.45e-12;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001915!4.09e-13!3;UBERON:0001982!4.09e-13!3;UBERON:0000988!3.00e-12!3;UBERON:0001473!9.93e-11!8;UBERON:0004536!9.93e-11!8;UBERON:0006558!9.93e-11!8;UBERON:0007029!2.84e-10!1;UBERON:0005705!3.40e-10!1;UBERON:0008193!3.40e-10!1;UBERON:0002514!3.40e-10!1;UBERON:0003462!3.40e-10!1;UBERON:0008001!3.40e-10!1;UBERON:0007914!3.40e-10!1;UBERON:0003457!3.40e-10!1;UBERON:0009292!3.40e-10!1;UBERON:0007375!3.40e-10!1;UBERON:0003323!3.40e-10!1;UBERON:0002397!3.40e-10!1;UBERON:0001709!3.40e-10!1;UBERON:0004066!3.40e-10!1;UBERON:0002244!3.40e-10!1;UBERON:0005620!3.40e-10!1;UBERON:0004068!3.40e-10!1;UBERON:0004362!3.40e-10!1;UBERON:0002298!4.10e-10!8;UBERON:0002465!1.11e-08!10;UBERON:0004733!6.61e-07!12;UBERON:0002028!6.61e-07!12;UBERON:0007277!6.61e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;9.74e-88;3!UBERON:0001915;9.74e-88;3!UBERON:0001982;9.74e-88;3!UBERON:0004638;9.05e-16;18!UBERON:0001986;9.05e-16;18!UBERON:0004852;9.05e-16;18!UBERON:0000487;4.01e-13;22!UBERON:0006914;1.09e-11;25!UBERON:0001473;1.35e-09;8!UBERON:0004536;1.35e-09;8!UBERON:0006558;1.35e-09;8!UBERON:0000490;1.25e-08;33!UBERON:0002465;6.13e-08;10!UBERON:0000055;1.90e-07;65!UBERON:0002049;3.38e-07;75!UBERON:0007798;3.38e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,9.74e-88,3;UBERON:0001915,9.74e-88,3;UBERON:0001982,9.74e-88,3;UBERON:0004638,9.05e-16,18;UBERON:0001986,9.05e-16,18;UBERON:0004852,9.05e-16,18;UBERON:0000487,4.01e-13,22;UBERON:0006914,1.09e-11,25;UBERON:0000055,8.58e-10,68;UBERON:0001473,1.35e-09,8;UBERON:0004536,1.35e-09,8;UBERON:0006558,1.35e-09,8;UBERON:0002049,1.14e-08,78;UBERON:0007798,1.14e-08,78;UBERON:0002465,6.13e-08,10 | |||
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|short_description=p@chr13:102379103..102379108,- | |short_description=p@chr13:102379103..102379108,- | ||
}} | }} |
Latest revision as of 14:15, 24 July 2015
Short description: | p@chr13:102379103..102379108, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:102379103..102379108, - |
Coexpression cluster: | C1358_Endothelial_gall_thyroid_throat_colon_Lymphatic_chorionic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 9.74e-88 | 3 |
endothelial cell of vascular tree | 1.16e-25 | 24 |
endothelial cell | 1.62e-17 | 36 |
blood vessel endothelial cell | 9.05e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.05e-16 | 18 |
meso-epithelial cell | 3.03e-14 | 45 |
lymphangioblast | 2.45e-12 | 6 |
endothelial cell of lymphatic vessel | 2.45e-12 | 6 |
vascular lymphangioblast | 2.45e-12 | 6 |
lining cell | 2.67e-11 | 58 |
barrier cell | 2.67e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 9.74e-88 | 3 |
endothelium of capillary | 9.74e-88 | 3 |
capillary | 9.74e-88 | 3 |
blood vessel endothelium | 9.05e-16 | 18 |
endothelium | 9.05e-16 | 18 |
cardiovascular system endothelium | 9.05e-16 | 18 |
simple squamous epithelium | 4.01e-13 | 22 |
squamous epithelium | 1.09e-11 | 25 |
vessel | 8.58e-10 | 68 |
lymphatic vessel | 1.35e-09 | 8 |
lymph vasculature | 1.35e-09 | 8 |
lymphatic part of lymphoid system | 1.35e-09 | 8 |
vasculature | 1.14e-08 | 78 |
vascular system | 1.14e-08 | 78 |
lymphoid system | 6.13e-08 | 10 |