FFCP PHASE1:Hg19::chr13:113719247..113719258,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:113719247..113719258,+ | |||
|coexpression_cluster_id=C164 | |coexpression_cluster_id=C164 | ||
|description=CAGE_peak_at_chr13:113719247..113719258,+ | |description=CAGE_peak_at_chr13:113719247..113719258,+ | ||
|id=chr13:113719247..113719258,+ | |id=chr13:113719247..113719258,+ | ||
|ontology_enrichment_celltype=CL:0002150!1.61e-16!3;CL:0000861!1.61e-16!3;CL:0000159!2.11e-11!2;CL:0002178!7.64e-08!3 | |ontology_enrichment_celltype=CL:0002150!1.61e-16!3;CL:0000861!1.61e-16!3;CL:0000159!2.11e-11!2;CL:0002178!7.64e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002178;6.76e-18;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,6.76e-18,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!9.04e-20!106;DOID:0050687!9.39e-15!143;DOID:162!1.60e-09!235;DOID:14566!3.33e-09!239;DOID:299!8.93e-07!25 | |ontology_enrichment_disease=DOID:305!9.04e-20!106;DOID:0050687!9.39e-15!143;DOID:162!1.60e-09!235;DOID:14566!3.33e-09!239;DOID:299!8.93e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:3493;4.32e-26;2!DOID:4362;3.42e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,4.32e-26,2;DOID:4362,3.60e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.16e-13!9;UBERON:0001557!8.32e-09!19 | |ontology_enrichment_uberon=UBERON:0001737!1.16e-13!9;UBERON:0001557!8.32e-09!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0002394;1.00e-13;4!UBERON:0003928;1.00e-13;4!UBERON:0000945;2.66e-11;5!UBERON:0010039;2.66e-11;5!UBERON:0000002;1.50e-09;6!UBERON:0001560;1.50e-09;6!UBERON:0002294;2.03e-08;7!UBERON:0001173;2.03e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.32e-09,6;UBERON:0003928,1.32e-09,6;UBERON:0000002,1.57e-09,6;UBERON:0001560,1.57e-09,6;UBERON:0000945,1.49e-07,8;UBERON:0010039,1.49e-07,8;UBERON:0002294,7.91e-07,9;UBERON:0001173,7.91e-07,9;UBERON:0004912,7.91e-07,9 | |||
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|short_description=p@chr13:113719247..113719258,+ | |short_description=p@chr13:113719247..113719258,+ | ||
}} | }} |
Latest revision as of 14:44, 24 July 2015
Short description: | p@chr13:113719247..113719258, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:113719247..113719258, + |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 6.76e-18 | 3 |
Ontology term | p-value | n |
---|---|---|
bile duct | 1.32e-09 | 6 |
digestive system duct | 1.32e-09 | 6 |
uterine cervix | 1.57e-09 | 6 |
neck of organ | 1.57e-09 | 6 |
stomach | 1.49e-07 | 8 |
food storage organ | 1.49e-07 | 8 |
biliary system | 7.91e-07 | 9 |
biliary tree | 7.91e-07 | 9 |
biliary bud | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.32e-26 | 2 |
cervical cancer | 3.60e-11 | 5 |