FFCP PHASE1:Hg19::chr13:114202163..114202178,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:114202163..114202178,+ | |||
|coexpression_cluster_id=C76 | |||
|description=CAGE_peak_at_chr13:114202163..114202178,+ | |description=CAGE_peak_at_chr13:114202163..114202178,+ | ||
|id=chr13:114202163..114202178,+ | |id=chr13:114202163..114202178,+ | ||
|ontology_enrichment_celltype=CL:0000064!2.74e-13!3;CL:0005012!2.74e-13!3;CL:0000067!2.74e-13!3;CL:0002304!2.74e-13!3;CL:0002583!3.68e-09!2 | |ontology_enrichment_celltype=CL:0000064!2.74e-13!3;CL:0005012!2.74e-13!3;CL:0000067!2.74e-13!3;CL:0002304!2.74e-13!3;CL:0002583!3.68e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000306;7.46e-29;4!CL:0002222;7.46e-29;4!CL:0002224;7.46e-29;4!CL:0002535;1.15e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,7.46e-29,4;CL:0002222,7.46e-29,4;CL:0002224,7.46e-29,4;CL:0002535,1.15e-15,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.33e-85;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4362;4.79e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,4.79e-07,5 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002037;6.03e-43;6!UBERON:0002680;5.91e-29;9!UBERON:0001895;5.91e-29;9!UBERON:0010077;7.46e-29;4!UBERON:0005389;7.46e-29;4!UBERON:0000484;7.46e-29;4!UBERON:0000965;7.46e-29;4!UBERON:0001803;7.46e-29;4!UBERON:0004733;6.10e-22;12!UBERON:0002028;6.10e-22;12!UBERON:0004732;2.55e-20;13!UBERON:0006955;1.15e-15;2!UBERON:0004801;1.15e-15;2!UBERON:0007625;3.48e-11;11!UBERON:0001801;5.36e-09;14!UBERON:0000019;7.18e-07;19!UBERON:0000047;7.18e-07;19!UBERON:0004088;7.18e-07;19!UBERON:0010230;7.18e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,6.48e-43,6;UBERON:0006215,6.48e-43,6;UBERON:0002680,6.20e-29,9;UBERON:0001895,6.20e-29,9;UBERON:0010092,6.20e-29,9;UBERON:0010077,7.46e-29,4;UBERON:0005389,7.46e-29,4;UBERON:0000484,7.46e-29,4;UBERON:0002546,7.46e-29,4;UBERON:0000965,7.46e-29,4;UBERON:0001803,7.46e-29,4;UBERON:0003073,7.46e-29,4;UBERON:0005426,7.46e-29,4;UBERON:0004733,6.33e-22,12;UBERON:0002028,6.33e-22,12;UBERON:0007277,6.33e-22,12;UBERON:0004732,2.64e-20,13;UBERON:0003076,1.04e-17,15;UBERON:0003057,1.04e-17,15;UBERON:0006955,1.15e-15,2;UBERON:0004801,1.15e-15,2;UBERON:0000076,5.41e-15,8;UBERON:0007625,3.48e-11,11;UBERON:0001801,5.36e-09,14;UBERON:0003075,7.91e-09,82;UBERON:0007284,7.91e-09,82;UBERON:0002346,1.96e-08,86;UBERON:0010371,4.99e-07,104 | |||
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| ||
|short_description=p@chr13:114202163..114202178,+ | |short_description=p@chr13:114202163..114202178,+ | ||
}} | }} |
Latest revision as of 14:48, 24 July 2015
Short description: | p@chr13:114202163..114202178, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:114202163..114202178, + |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 7.46e-29 | 4 |
vertebrate lens cell | 7.46e-29 | 4 |
lens epithelial cell | 7.46e-29 | 4 |
epithelial cell of cervix | 1.15e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 6.48e-43 | 6 |
rhombic lip | 6.48e-43 | 6 |
regional part of metencephalon | 6.20e-29 | 9 |
metencephalon | 6.20e-29 | 9 |
future metencephalon | 6.20e-29 | 9 |
cuboidal epithelium | 7.46e-29 | 4 |
transparent eye structure | 7.46e-29 | 4 |
simple cuboidal epithelium | 7.46e-29 | 4 |
cranial placode | 7.46e-29 | 4 |
lens of camera-type eye | 7.46e-29 | 4 |
epithelium of lens | 7.46e-29 | 4 |
lens placode | 7.46e-29 | 4 |
lens vesicle | 7.46e-29 | 4 |
segmental subdivision of hindbrain | 6.33e-22 | 12 |
hindbrain | 6.33e-22 | 12 |
presumptive hindbrain | 6.33e-22 | 12 |
segmental subdivision of nervous system | 2.64e-20 | 13 |
posterior neural tube | 1.04e-17 | 15 |
chordal neural plate | 1.04e-17 | 15 |
uterine epithelium | 1.15e-15 | 2 |
cervix epithelium | 1.15e-15 | 2 |
external ectoderm | 5.41e-15 | 8 |
pigment epithelium of eye | 3.48e-11 | 11 |
anterior segment of eyeball | 5.36e-09 | 14 |
neural plate | 7.91e-09 | 82 |
presumptive neural plate | 7.91e-09 | 82 |
neurectoderm | 1.96e-08 | 86 |
ecto-epithelium | 4.99e-07 | 104 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 4.79e-07 | 5 |