FFCP PHASE1:Hg19::chr13:114830905..114830916,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:114830905..114830916,- | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr13:114830905..114830916,- | |description=CAGE_peak_at_chr13:114830905..114830916,- | ||
|id=chr13:114830905..114830916,- | |id=chr13:114830905..114830916,- | ||
|ontology_enrichment_celltype=CL:0002057!1.92e-50!42;CL:0000860!1.76e-49!45;CL:0000766!3.69e-42!76;CL:0002194!1.20e-36!63;CL:0000576!1.20e-36!63;CL:0000040!1.20e-36!63;CL:0000559!1.20e-36!63;CL:0002009!3.17e-35!65;CL:0000557!1.00e-33!71;CL:0000839!5.05e-32!70;CL:0000738!4.23e-31!140;CL:0000763!1.19e-29!112;CL:0000049!1.19e-29!112;CL:0002087!1.21e-26!119;CL:0000037!1.64e-26!172;CL:0000566!1.64e-26!172;CL:0000988!2.83e-24!182;CL:0002032!8.17e-23!165;CL:0000837!8.17e-23!165;CL:0002031!8.94e-21!124;CL:0000134!7.85e-15!358;CL:0002320!3.15e-14!365;CL:0000034!5.59e-14!444;CL:0000723!8.95e-14!436;CL:0000048!1.54e-13!430;CL:0002393!1.61e-13!9;CL:0002397!1.61e-13!9;CL:0000219!2.02e-13!390;CL:0000094!4.11e-11!8;CL:0002371!1.13e-09!591;CL:0000144!9.48e-09!625;CL:0000842!2.40e-08!3;CL:0000767!2.99e-08!3;CL:0000081!7.58e-08!11 | |ontology_enrichment_celltype=CL:0002057!1.92e-50!42;CL:0000860!1.76e-49!45;CL:0000766!3.69e-42!76;CL:0002194!1.20e-36!63;CL:0000576!1.20e-36!63;CL:0000040!1.20e-36!63;CL:0000559!1.20e-36!63;CL:0002009!3.17e-35!65;CL:0000557!1.00e-33!71;CL:0000839!5.05e-32!70;CL:0000738!4.23e-31!140;CL:0000763!1.19e-29!112;CL:0000049!1.19e-29!112;CL:0002087!1.21e-26!119;CL:0000037!1.64e-26!172;CL:0000566!1.64e-26!172;CL:0000988!2.83e-24!182;CL:0002032!8.17e-23!165;CL:0000837!8.17e-23!165;CL:0002031!8.94e-21!124;CL:0000134!7.85e-15!358;CL:0002320!3.15e-14!365;CL:0000034!5.59e-14!444;CL:0000723!8.95e-14!436;CL:0000048!1.54e-13!430;CL:0002393!1.61e-13!9;CL:0002397!1.61e-13!9;CL:0000219!2.02e-13!390;CL:0000094!4.11e-11!8;CL:0002371!1.13e-09!591;CL:0000144!9.48e-09!625;CL:0000842!2.40e-08!3;CL:0000767!2.99e-08!3;CL:0000081!7.58e-08!11 | ||
|ontology_enrichment_celltype_v019=CL:0002393;8.65e-18;6!CL:0002397;8.65e-18;6!CL:0000226;1.42e-15;3!CL:0000842;1.42e-15;3!CL:0000576;2.69e-14;48!CL:0000860;7.14e-14;33!CL:0002057;7.14e-14;33!CL:0000473;1.20e-12;39!CL:0000234;1.20e-12;39!CL:0002032;2.60e-12;1!CL:0000557;2.60e-12;1!CL:0002591;2.60e-12;1!CL:0000766;1.14e-11;69!CL:0000771;5.41e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.79e-26,48;CL:0000234,1.79e-26,48;CL:0000860,3.64e-25,42;CL:0002057,3.64e-25,42;CL:0000766,6.32e-24,72;CL:0000557,8.10e-22,67;CL:0002194,6.80e-21,59;CL:0000576,6.80e-21,59;CL:0000040,6.80e-21,59;CL:0000559,6.80e-21,59;CL:0002009,3.57e-20,61;CL:0000839,1.47e-18,66;CL:0000763,4.80e-18,108;CL:0000049,4.80e-18,108;CL:0000738,3.34e-16,136;CL:0000226,1.22e-15,3;CL:0000842,1.22e-15,3;CL:0000037,1.07e-14,168;CL:0002087,2.45e-14,115;CL:0000988,7.66e-14,177;CL:0002591,3.08e-12,1;CL:0002393,4.68e-12,9;CL:0002397,4.68e-12,9;CL:0002032,1.71e-11,161;CL:0000837,1.71e-11,161;CL:0002031,1.35e-09,120;CL:0000771,5.41e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;3.72e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!2.60e-31!86;UBERON:0002371!1.10e-30!80;UBERON:0004765!3.13e-28!101;UBERON:0001434!3.13e-28!101;UBERON:0002390!1.02e-26!102;UBERON:0003061!1.02e-26!102;UBERON:0002193!7.63e-25!112;UBERON:0002405!1.41e-19!115;UBERON:0002204!1.12e-17!167;UBERON:0003081!1.99e-14!216;UBERON:0002384!2.08e-13!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;8.76e-07;2!UBERON:0002012;8.76e-07;2!UBERON:0008886;8.76e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.41e-20,98;UBERON:0003061,5.41e-20,98;UBERON:0002371,4.45e-19,76;UBERON:0002193,5.53e-18,108;UBERON:0001474,1.40e-17,82;UBERON:0004765,6.88e-16,90;UBERON:0002405,2.50e-15,93;UBERON:0001434,3.77e-14,100;UBERON:0003081,3.87e-10,203;UBERON:0002204,2.63e-09,167;UBERON:0000078,9.54e-07,2;UBERON:0007497,9.54e-07,2;UBERON:0003643,9.54e-07,2;UBERON:0003504,9.54e-07,2;UBERON:0003469,9.54e-07,2;UBERON:0003496,9.54e-07,2;UBERON:0002012,9.54e-07,2;UBERON:0008886,9.54e-07,2;UBERON:0007303,9.54e-07,2;UBERON:0002061,9.54e-07,2;UBERON:0005432,9.54e-07,2;UBERON:0004363,9.54e-07,2 | |||
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|short_description=p@chr13:114830905..114830916,- | |short_description=p@chr13:114830905..114830916,- | ||
}} | }} |
Latest revision as of 14:52, 24 July 2015
Short description: | p@chr13:114830905..114830916, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:114830905..114830916, - |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.79e-26 | 48 |
phagocyte | 1.79e-26 | 48 |
classical monocyte | 3.64e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.64e-25 | 42 |
myeloid leukocyte | 6.32e-24 | 72 |
granulocyte monocyte progenitor cell | 8.10e-22 | 67 |
monopoietic cell | 6.80e-21 | 59 |
monocyte | 6.80e-21 | 59 |
monoblast | 6.80e-21 | 59 |
promonocyte | 6.80e-21 | 59 |
macrophage dendritic cell progenitor | 3.57e-20 | 61 |
myeloid lineage restricted progenitor cell | 1.47e-18 | 66 |
myeloid cell | 4.80e-18 | 108 |
common myeloid progenitor | 4.80e-18 | 108 |
leukocyte | 3.34e-16 | 136 |
single nucleate cell | 1.22e-15 | 3 |
mononuclear cell | 1.22e-15 | 3 |
hematopoietic stem cell | 1.07e-14 | 168 |
nongranular leukocyte | 2.45e-14 | 115 |
hematopoietic cell | 7.66e-14 | 177 |
smooth muscle cell of the pulmonary artery | 3.08e-12 | 1 |
intermediate monocyte | 4.68e-12 | 9 |
CD14-positive, CD16-positive monocyte | 4.68e-12 | 9 |
hematopoietic oligopotent progenitor cell | 1.71e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.71e-11 | 161 |
hematopoietic lineage restricted progenitor cell | 1.35e-09 | 120 |
eosinophil | 5.41e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.41e-20 | 98 |
blood island | 5.41e-20 | 98 |
bone marrow | 4.45e-19 | 76 |
hemolymphoid system | 5.53e-18 | 108 |
bone element | 1.40e-17 | 82 |
skeletal element | 6.88e-16 | 90 |
immune system | 2.50e-15 | 93 |
skeletal system | 3.77e-14 | 100 |
lateral plate mesoderm | 3.87e-10 | 203 |
musculoskeletal system | 2.63e-09 | 167 |
mixed ectoderm/mesoderm/endoderm-derived structure | 9.54e-07 | 2 |
developing epithelial placode | 9.54e-07 | 2 |
respiratory system arterial blood vessel | 9.54e-07 | 2 |
respiratory system blood vessel | 9.54e-07 | 2 |
respiratory system artery | 9.54e-07 | 2 |
head blood vessel | 9.54e-07 | 2 |
pulmonary artery | 9.54e-07 | 2 |
pulmonary vascular system | 9.54e-07 | 2 |
pharyngeal vasculature | 9.54e-07 | 2 |
truncus arteriosus | 9.54e-07 | 2 |
aortic sac | 9.54e-07 | 2 |
pharyngeal arch artery | 9.54e-07 | 2 |