FFCP PHASE1:Hg19::chr13:23734308..23734318,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:23734308..23734318,+ | |||
|coexpression_cluster_id=C38 | |coexpression_cluster_id=C38 | ||
|description=CAGE_peak_at_chr13:23734308..23734318,+ | |description=CAGE_peak_at_chr13:23734308..23734318,+ | ||
|id=chr13:23734308..23734318,+ | |id=chr13:23734308..23734318,+ | ||
|ontology_enrichment_celltype=CL:0002579!1.81e-09!3 | |ontology_enrichment_celltype=CL:0002579!1.81e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0000138;7.67e-18;6!CL:0000153;2.19e-12;9!CL:0000447;2.19e-12;9!CL:0000327;5.55e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,7.67e-18,6;CL:0000138,7.67e-18,6;CL:0000153,2.19e-12,9;CL:0000447,2.19e-12,9;CL:0000327,5.55e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3371!2.16e-26!1;DOID:4549!2.16e-26!1;DOID:5861!2.16e-26!1;DOID:6496!2.16e-26!1;DOID:5093!8.66e-26!4;DOID:1612!8.66e-26!4 | |ontology_enrichment_disease=DOID:3371!2.16e-26!1;DOID:4549!2.16e-26!1;DOID:5861!2.16e-26!1;DOID:6496!2.16e-26!1;DOID:5093!8.66e-26!4;DOID:1612!8.66e-26!4 | ||
|ontology_enrichment_disease_v019=DOID:3371;9.37e-99;1!DOID:4549;9.37e-99;1!DOID:5861;9.37e-99;1!DOID:6496;9.37e-99;1!DOID:5093;7.14e-26;4!DOID:1612;7.14e-26;4!DOID:201;7.67e-18;6!DOID:0060100;7.67e-18;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,9.37e-99,1;DOID:4549,9.37e-99,1;DOID:5861,9.37e-99,1;DOID:6496,9.37e-99,1;DOID:5093,7.14e-26,4;DOID:1612,7.14e-26,4;DOID:201,7.67e-18,6;DOID:0060100,7.67e-18,6 | |||
|ontology_enrichment_uberon=UBERON:0000310!5.98e-11!10;UBERON:0001443!4.83e-10!11;UBERON:0002418!1.01e-09!3;UBERON:0004755!1.01e-09!3 | |ontology_enrichment_uberon=UBERON:0000310!5.98e-11!10;UBERON:0001443!4.83e-10!11;UBERON:0002418!1.01e-09!3;UBERON:0004755!1.01e-09!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002418;4.27e-34;3!UBERON:0004755;4.27e-34;3!UBERON:0000310;3.02e-11;10!UBERON:0001443;2.37e-10;11!UBERON:0001474;7.18e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,4.27e-34,3;UBERON:0004755,4.27e-34,3;UBERON:0000310,3.02e-11,10;UBERON:0001443,2.37e-10,11 | |||
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|short_description=p@chr13:23734308..23734318,+ | |short_description=p@chr13:23734308..23734318,+ | ||
}} | }} |
Latest revision as of 15:07, 24 July 2015
Short description: | p@chr13:23734308..23734318, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:23734308..23734318, + |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 7.67e-18 | 6 |
chondrocyte | 7.67e-18 | 6 |
GAG secreting cell | 2.19e-12 | 9 |
carbohydrate secreting cell | 2.19e-12 | 9 |
extracellular matrix secreting cell | 5.55e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 4.27e-34 | 3 |
skeletal tissue | 4.27e-34 | 3 |
breast | 3.02e-11 | 10 |
chest | 2.37e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 9.37e-99 | 1 |
extraosseous chondrosarcoma | 9.37e-99 | 1 |
myxoid chondrosarcoma | 9.37e-99 | 1 |
extraskeletal myxoid chondrosarcoma | 9.37e-99 | 1 |
thoracic cancer | 7.14e-26 | 4 |
breast cancer | 7.14e-26 | 4 |
connective tissue cancer | 7.67e-18 | 6 |
musculoskeletal system cancer | 7.67e-18 | 6 |