FFCP PHASE1:Hg19::chr13:34494583..34494584,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:34494583..34494584,+ | |||
|description=CAGE_peak_at_chr13:34494583..34494584,+ | |description=CAGE_peak_at_chr13:34494583..34494584,+ | ||
|id=chr13:34494583..34494584,+ | |id=chr13:34494583..34494584,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002605;1.35e-09;3!CL:0002615;1.35e-09;3!CL:0000243;8.59e-07;15!CL:0000125;8.59e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.54e-09,3;CL:0002615,1.81e-09,3;CL:0000243,8.59e-07,15;CL:0000125,8.59e-07,15;CL:0000030,8.59e-07,15;CL:0000339,8.59e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.35e-09;3!CL:0000339;8.59e-07;15 | |||
|ontology_enrichment_disease=DOID:162!1.30e-07!235;DOID:14566!4.54e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:171;6.60e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,7.67e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0000955!5.88e-09!69;UBERON:0006238!5.88e-09!69;UBERON:0001017!1.32e-08!82;UBERON:0000073!1.60e-08!94;UBERON:0001016!1.60e-08!94;UBERON:0001893!2.01e-08!34;UBERON:0005743!2.80e-08!86;UBERON:0001049!3.04e-08!57;UBERON:0005068!3.04e-08!57;UBERON:0006241!3.04e-08!57;UBERON:0007135!3.04e-08!57;UBERON:0002020!6.45e-08!34;UBERON:0003528!6.45e-08!34;UBERON:0002791!6.74e-08!33;UBERON:0002616!1.10e-07!59;UBERON:0001869!1.72e-07!32;UBERON:0002780!5.55e-07!41;UBERON:0001890!5.55e-07!41;UBERON:0006240!5.55e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0005795;5.22e-26;1!UBERON:0002050;8.97e-21;5!UBERON:0005423;8.97e-21;5!UBERON:0002114;1.35e-09;2!UBERON:0002346;1.64e-07;4!UBERON:0000923;1.64e-07;4!UBERON:0010316;1.64e-07;4!UBERON:0005291;1.64e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002114,1.01e-09,2 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14494394852423,0.547497700291537,0.251085279189606,0.764134057479513,0.492603536699674,0.629686250509434,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0.167186495390678,0,0.473447805734733,0,0.222820913770347,0,0,0.270803863765016,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0.383220493601921,0,0,0,0,0.950452044448374,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44905874525234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.702254033511242,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0.154048617114644,0,0,0,0.435050081742686,0.255679882248303,0,0,0,0.382838137483752,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0.427296284509893,0,0,0.185803175125719,0.144269212976445,0.497992903438899,0.159426272728822,0.199579371432817,0,0.635020748171649,0,0.280797178113459,0.228234679033192,0,0,0.169291777801603,0.321176150207399,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0.307160702099232,0,0.281338832821026,0,0.494411622680279,0.211125408127993,0,0,0,0.102268682502155,0,0,0,0,0.511572370226872,0,0,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0.254253650292766,0,0.344743373241465,0.583209226766509,0.520874984799877,0,0.241192877250816,1.52581736317083,0.995213339381022,0.591095237907095,0,0.32681539055697,0.278847488557207,0.0769502585037971,0,0,0.179515288819544,0.434589487688032,0,0,0,0,0,0.498635045700469,0.451191321234361,0,0,0,0.317873157960757,0.210998064528027,0.163232808159148,0.141353071433941,0,0,0,0,0.593042257361244,0.123563938946503,0.104421949505455,0.067401132980677,0,0,0,0.391329237864179,0,0,0,0.30607276163049,0.126373159256976,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0.0967563312890851,0.146178634172371,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0.171594997861965,0.14405479798815,0,0,0,0,0.101998217636322,0,0.600420288709789,0,0,0,0.525774708558629,0,0,0,0.199679000498991,0,0,0.201550417460179,0,0,0.315132729228895,0.0824158583811665,0.26961417541674,0,0.254019996197353,0,0.136203406111576,0.482259445395058,0.275078873194468,0,0,0.77380195455795,0,0,0,0,0,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0,0,0,0,0.79339561045614,0,0,0.106787412567695,0.471612915298998,0,0,0.395223263795889,0,0,0,0,0,0.327872630709804,0,0,0.244052529803926,0.3755727921195,0,0.110929051536852,0.18628920882415,1.38348634936231,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0.19998739585493,0.426766918776564,0,0,0,0,0,0.511577485214607,0,0.314531883711793,1.20130602011215,0,1.06287460050841,0.619678821295011,0,0,0.70975570501128,0,0,0,0.192687675289379,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0.198916222116275,0,0.20170506870352,0,0,0,0,0.202612753855184,0.781078098613847,0.206686796501184,0.0634158101939068,0.546974809018219,0,0,0,0.127762427639595,0,0,0,0,0,0.230467975111559,0.171488009437418,0,0,0,0.111231401892069,0.078493092850514,0.471346769748006,0,0.913158720509496,0,0.47775168788705,0.142953088353313,0.47404083519818,0.116241425368125,0.695433089210318,0,0,0.17071847709395,0,0,0,0,0,0.4582137370881,0,0,0,0.098150233615243,0.121917924982269,0.647428837187895,0,0,0,0.467878926924211,0,0,0.33883824611688,0.879524133963433,0,0.0771741581079447,0,0.470317296361523,0.245148321753905,0.235676547101626,0,0,0.4226557275834,0,0,0,0.199882311849858,0,0,0,0,0,0.286679166302903,0,0.0679914901909147,1.74540276136151,0,0,0,0,0.252332849670158,0.437062287854782,0.126698501011437,0.101988829741982,0,0.0918948995348449,0.752122617877125,0.0757786982182394,0.535928260312357,0.829169439458779,0,0,0.476128862927481,0,0,0.112131862580613,0,0,0,0,0.134704106029175,0,0.332660356546013,0,0,0,0,0,0,1.22068853494722,0,0,0.641136984606466 | |phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14494394852423,0.547497700291537,0.251085279189606,0.764134057479513,0.492603536699674,0.629686250509434,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0.167186495390678,0,0.473447805734733,0,0.222820913770347,0,0,0.270803863765016,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0.383220493601921,0,0,0,0,0.950452044448374,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44905874525234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.702254033511242,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0.154048617114644,0,0,0,0.435050081742686,0.255679882248303,0,0,0,0.382838137483752,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0.427296284509893,0,0,0.185803175125719,0.144269212976445,0.497992903438899,0.159426272728822,0.199579371432817,0,0.635020748171649,0,0.280797178113459,0.228234679033192,0,0,0.169291777801603,0.321176150207399,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0.307160702099232,0,0.281338832821026,0,0.494411622680279,0.211125408127993,0,0,0,0.102268682502155,0,0,0,0,0.511572370226872,0,0,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0.254253650292766,0,0.344743373241465,0.583209226766509,0.520874984799877,0,0.241192877250816,1.52581736317083,0.995213339381022,0.591095237907095,0,0.32681539055697,0.278847488557207,0.0769502585037971,0,0,0.179515288819544,0.434589487688032,0,0,0,0,0,0.498635045700469,0.451191321234361,0,0,0,0.317873157960757,0.210998064528027,0.163232808159148,0.141353071433941,0,0,0,0,0.593042257361244,0.123563938946503,0.104421949505455,0.067401132980677,0,0,0,0.391329237864179,0,0,0,0.30607276163049,0.126373159256976,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0.0967563312890851,0.146178634172371,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0.171594997861965,0.14405479798815,0,0,0,0,0.101998217636322,0,0.600420288709789,0,0,0,0.525774708558629,0,0,0,0.199679000498991,0,0,0.201550417460179,0,0,0.315132729228895,0.0824158583811665,0.26961417541674,0,0.254019996197353,0,0.136203406111576,0.482259445395058,0.275078873194468,0,0,0.77380195455795,0,0,0,0,0,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0,0,0,0,0.79339561045614,0,0,0.106787412567695,0.471612915298998,0,0,0.395223263795889,0,0,0,0,0,0.327872630709804,0,0,0.244052529803926,0.3755727921195,0,0.110929051536852,0.18628920882415,1.38348634936231,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0.19998739585493,0.426766918776564,0,0,0,0,0,0.511577485214607,0,0.314531883711793,1.20130602011215,0,1.06287460050841,0.619678821295011,0,0,0.70975570501128,0,0,0,0.192687675289379,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0.198916222116275,0,0.20170506870352,0,0,0,0,0.202612753855184,0.781078098613847,0.206686796501184,0.0634158101939068,0.546974809018219,0,0,0,0.127762427639595,0,0,0,0,0,0.230467975111559,0.171488009437418,0,0,0,0.111231401892069,0.078493092850514,0.471346769748006,0,0.913158720509496,0,0.47775168788705,0.142953088353313,0.47404083519818,0.116241425368125,0.695433089210318,0,0,0.17071847709395,0,0,0,0,0,0.4582137370881,0,0,0,0.098150233615243,0.121917924982269,0.647428837187895,0,0,0,0.467878926924211,0,0,0.33883824611688,0.879524133963433,0,0.0771741581079447,0,0.470317296361523,0.245148321753905,0.235676547101626,0,0,0.4226557275834,0,0,0,0.199882311849858,0,0,0,0,0,0.286679166302903,0,0.0679914901909147,1.74540276136151,0,0,0,0,0.252332849670158,0.437062287854782,0.126698501011437,0.101988829741982,0,0.0918948995348449,0.752122617877125,0.0757786982182394,0.535928260312357,0.829169439458779,0,0,0.476128862927481,0,0,0.112131862580613,0,0,0,0,0.134704106029175,0,0.332660356546013,0,0,0,0,0,0,1.22068853494722,0,0,0.641136984606466 | ||
|short_description=p@chr13:34494583..34494584,+ | |short_description=p@chr13:34494583..34494584,+ | ||
}} | }} |
Latest revision as of 15:44, 24 July 2015
Short description: | p@chr13:34494583..34494584, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:34494583..34494584, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.54e-09 | 3 |
adipocyte of omentum tissue | 1.81e-09 | 3 |
glial cell (sensu Vertebrata) | 8.59e-07 | 15 |
glial cell | 8.59e-07 | 15 |
glioblast | 8.59e-07 | 15 |
glioblast (sensu Vertebrata) | 8.59e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
duodenum | 1.01e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 7.67e-11 | 10 |