FFCP PHASE1:Hg19::chr13:37575209..37575223,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:37575209..37575223,- | |||
|coexpression_cluster_id=C123 | |||
|description=CAGE_peak_at_chr13:37575209..37575223,- | |description=CAGE_peak_at_chr13:37575209..37575223,- | ||
|id=chr13:37575209..37575223,- | |id=chr13:37575209..37575223,- | ||
|ontology_enrichment_celltype=CL:0000542!9.34e-17!53;CL:0000051!9.34e-17!53;CL:0000838!9.16e-16!52;CL:0000738!5.20e-14!140;CL:0000037!8.28e-13!172;CL:0000566!8.28e-13!172;CL:0000988!7.65e-12!182;CL:0002087!1.64e-11!119;CL:0002032!3.42e-10!165;CL:0000837!3.42e-10!165;CL:0002031!1.52e-09!124;CL:0000791!4.63e-09!18;CL:0000789!4.63e-09!18;CL:0002420!4.63e-09!18;CL:0002419!4.63e-09!18;CL:0000790!4.63e-09!18;CL:0000224!1.55e-07!4;CL:0000624!2.51e-07!6;CL:0000945!2.76e-07!24;CL:0000826!2.76e-07!24;CL:0000084!8.83e-07!25;CL:0000827!8.83e-07!25 | |ontology_enrichment_celltype=CL:0000542!9.34e-17!53;CL:0000051!9.34e-17!53;CL:0000838!9.16e-16!52;CL:0000738!5.20e-14!140;CL:0000037!8.28e-13!172;CL:0000566!8.28e-13!172;CL:0000988!7.65e-12!182;CL:0002087!1.64e-11!119;CL:0002032!3.42e-10!165;CL:0000837!3.42e-10!165;CL:0002031!1.52e-09!124;CL:0000791!4.63e-09!18;CL:0000789!4.63e-09!18;CL:0002420!4.63e-09!18;CL:0002419!4.63e-09!18;CL:0000790!4.63e-09!18;CL:0000224!1.55e-07!4;CL:0000624!2.51e-07!6;CL:0000945!2.76e-07!24;CL:0000826!2.76e-07!24;CL:0000084!8.83e-07!25;CL:0000827!8.83e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000623;1.48e-29;3!CL:0000791;6.80e-19;18!CL:0000789;6.80e-19;18!CL:0002419;6.80e-19;18!CL:0000624;5.43e-15;6!CL:0000542;1.01e-14;53!CL:0000084;1.71e-13;25!CL:0000226;2.06e-13;3!CL:0000842;2.06e-13;3!CL:0002032;1.10e-10;1!CL:0000228;1.10e-10;1!CL:0000557;1.10e-10;1!CL:0002372;1.10e-10;1!CL:0000625;1.57e-08;11!CL:0002087;2.85e-07;104!CL:0000236;3.14e-07;13!CL:0002393;3.80e-07;6!CL:0002397;3.80e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.80e-29,3;CL:0000825,1.80e-29,3;CL:0000838,9.39e-25,52;CL:0000542,2.98e-24,53;CL:0000051,2.98e-24,53;CL:0000791,7.48e-19,18;CL:0000789,7.48e-19,18;CL:0002420,7.48e-19,18;CL:0002419,7.48e-19,18;CL:0000790,7.48e-19,18;CL:0002087,1.51e-18,115;CL:0000738,1.80e-17,136;CL:0000037,1.66e-15,168;CL:0000624,5.83e-15,6;CL:0000988,1.40e-14,177;CL:0000084,1.82e-13,25;CL:0000827,1.82e-13,25;CL:0000226,2.49e-13,3;CL:0000842,2.49e-13,3;CL:0002031,2.75e-13,120;CL:0002032,1.52e-12,161;CL:0000837,1.52e-12,161;CL:0000228,9.97e-11,1;CL:0002372,9.97e-11,1;CL:0000625,1.63e-08,11;CL:0000134,8.44e-07,354;CL:0000236,8.87e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;6.80e-19;18!CL:0000051;1.01e-14;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr13:37575209..37575223,- | |short_description=p@chr13:37575209..37575223,- | ||
}} | }} |
Latest revision as of 15:51, 24 July 2015
Short description: | p@chr13:37575209..37575223, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:37575209..37575223, - |
Coexpression cluster: | C123_CD19_Natural_CD8_CD4_CD14_Peripheral_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.80e-29 | 3 |
pro-NK cell | 1.80e-29 | 3 |
lymphoid lineage restricted progenitor cell | 9.39e-25 | 52 |
lymphocyte | 2.98e-24 | 53 |
common lymphoid progenitor | 2.98e-24 | 53 |
mature alpha-beta T cell | 7.48e-19 | 18 |
alpha-beta T cell | 7.48e-19 | 18 |
immature T cell | 7.48e-19 | 18 |
mature T cell | 7.48e-19 | 18 |
immature alpha-beta T cell | 7.48e-19 | 18 |
nongranular leukocyte | 1.51e-18 | 115 |
leukocyte | 1.80e-17 | 136 |
hematopoietic stem cell | 1.66e-15 | 168 |
CD4-positive, alpha-beta T cell | 5.83e-15 | 6 |
hematopoietic cell | 1.40e-14 | 177 |
T cell | 1.82e-13 | 25 |
pro-T cell | 1.82e-13 | 25 |
single nucleate cell | 2.49e-13 | 3 |
mononuclear cell | 2.49e-13 | 3 |
hematopoietic lineage restricted progenitor cell | 2.75e-13 | 120 |
hematopoietic oligopotent progenitor cell | 1.52e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.52e-12 | 161 |
multinucleate cell | 9.97e-11 | 1 |
myotube | 9.97e-11 | 1 |
CD8-positive, alpha-beta T cell | 1.63e-08 | 11 |
mesenchymal cell | 8.44e-07 | 354 |
B cell | 8.87e-07 | 14 |