FFCP PHASE1:Hg19::chr13:38153005..38153062,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr13:38153005..38153062,- to FFCP PHASE1:Hg19::chr13:38153005..38153062,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:38153005..38153062,- | |||
|coexpression_cluster_id=C349 | |||
|description=CAGE_peak_at_chr13:38153005..38153062,- | |||
|id=chr13:38153005..38153062,- | |||
|ontology_enrichment_celltype=CL:0000055!9.27e-25!180;CL:0000057!2.17e-18!75;CL:0000680!4.02e-12!57;CL:0000056!4.02e-12!57;CL:0000355!4.02e-12!57;CL:0000187!2.99e-11!54;CL:0002334!1.50e-10!12;CL:0000723!2.84e-10!436;CL:0000048!3.36e-10!430;CL:0000183!1.88e-09!59;CL:0000034!1.92e-09!444;CL:0000393!3.92e-09!60;CL:0000211!3.92e-09!60;CL:0000222!5.06e-08!119;CL:0002494!5.03e-07!16;CL:0000192!7.55e-07!42;CL:0000514!7.55e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.60e-18;12!CL:0002548;1.00e-10;6!CL:1000306;9.04e-09;4!CL:0002547;9.04e-09;4!CL:0002580;2.51e-07;3!CL:0002579;3.32e-07;3!CL:0000135;4.17e-07;3!CL:0000388;4.17e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,2.51e-18,12;CL:0000057,8.17e-18,76;CL:0002548,6.37e-11,6;CL:1000306,9.02e-09,4;CL:0002547,9.02e-09,4;CL:0002580,2.32e-07,3;CL:0000135,2.69e-07,3;CL:0000388,2.69e-07,3;CL:0000048,2.83e-07,427;CL:0002579,2.98e-07,3;CL:0000723,6.10e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!8.42e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.07e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.05e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!1.13e-12!61;UBERON:0002036!1.13e-12!61;UBERON:0003082!1.13e-12!61;UBERON:0002385!1.18e-12!63;UBERON:0001015!1.18e-12!63;UBERON:0000383!1.18e-12!63;UBERON:0004872!3.40e-11!84;UBERON:0000914!1.87e-10!83;UBERON:0002329!1.87e-10!83;UBERON:0003077!1.87e-10!83;UBERON:0003059!1.87e-10!83;UBERON:0007282!1.87e-10!83;UBERON:0009618!1.87e-10!83;UBERON:0007285!1.87e-10!83;UBERON:0000948!1.89e-10!24;UBERON:0005498!1.89e-10!24;UBERON:0004140!1.89e-10!24;UBERON:0009881!1.89e-10!24;UBERON:0004141!1.89e-10!24;UBERON:0003084!1.89e-10!24;UBERON:0007005!1.89e-10!24;UBERON:0004139!1.89e-10!24;UBERON:0004291!1.89e-10!24;UBERON:0004290!3.41e-10!70;UBERON:0007100!1.21e-08!27;UBERON:0001637!1.75e-08!42;UBERON:0003509!1.75e-08!42;UBERON:0004572!1.75e-08!42;UBERON:0000486!2.60e-08!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;9.04e-09;4!UBERON:0000415;9.04e-09;4!UBERON:0007240;9.04e-09;4!UBERON:0005742;9.04e-09;4!UBERON:0005734;9.04e-09;4!UBERON:0004664;9.04e-09;4!UBERON:0004663;9.04e-09;4!UBERON:0003688;2.92e-08;6!UBERON:0002358;2.92e-08;6!UBERON:0003684;2.92e-08;6!UBERON:0001178;2.92e-08;6!UBERON:0007846;4.17e-07;3!UBERON:0000043;4.17e-07;3!UBERON:0007845;4.17e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,9.02e-09,4;UBERON:0007240,9.02e-09,4;UBERON:0005742,9.02e-09,4;UBERON:0005734,9.02e-09,4;UBERON:0004664,9.02e-09,4;UBERON:0004663,9.02e-09,4;UBERON:0003688,4.00e-08,6;UBERON:0002358,4.00e-08,6;UBERON:0003684,4.00e-08,6;UBERON:0001178,4.00e-08,6;UBERON:0000948,2.31e-07,24;UBERON:0005498,2.31e-07,24;UBERON:0004140,2.31e-07,24;UBERON:0009881,2.31e-07,24;UBERON:0004141,2.31e-07,24;UBERON:0003084,2.31e-07,24;UBERON:0007005,2.31e-07,24;UBERON:0004139,2.31e-07,24;UBERON:0004291,2.31e-07,24;UBERON:0007846,2.69e-07,3;UBERON:0000043,2.69e-07,3;UBERON:0007845,2.69e-07,3 | |||
|phase1_expression=0.726713517082227,0.856402095563933,1.40954404095971,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0,0,0.247532705920093,0,0.672325146451775,2.41077811209591,1.46062018077475,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,2.68280343881454,0.767175371061182,1.80719576192283,1.00267582127178,0.289693037921647,1.5905718941022,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838998872419812,0.550236083880135,0,0,0,0,0,0,0,0,1.62028389576352,0,0,0,0,0,0,0,0,0,22.8607097779847,2.65924074495618,3.44263870114369,6.3104056564739,3.54668382198357,1.68203280042692,2.1349799145941,3.45334567784024,1.55605517699883,1.88594940897563,1.30769522490767,0,4.60940739583999,0.234321431833797,0,0,0,0,0.161872944368132,0,0,0,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0.438977620880838,0.30648779579902,0.150238058906597,3.62982986112067,0.538168907066586,1.2813443329114,1.48352330811693,1.80054657650641,0.309157587715317,2.31876486041066,0.37223371266318,0.168776332241266,0.292311015483596,0.252433774244115,1.84099797284599,0.323292113637624,0.710019185033229,0.403008392910561,0.169560592310488,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548751427043128,0,0.100528972411631,0,0,0,0,0,0.352226082707465,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,1.80980402060889,0,0,1.06375246633948,1.04007436911366,0,0,0,0.57191197463259,0,0,0.977208552881205,0.355391948742546,0,13.5647719676814,7.84380112740265,31.59146521353,0,0,0,3.11512312139057,2.29723871668228,0,2.17171960001369,0,1.79060963239896,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0.12269149171914,0,0,8.31883446123229,6.78030157429215,2.20783381047509,0.35142424497814,1.20378439891088,6.82222512167955,1.03473071292505,0,0.184369168541703,0,0,0,0,0,0,0,0,0,7.19512642674453,3.99001130548962,6.73584226639377,4.86928767171664,2.55853624533352,11.2597744800525,0,1.07946785661859,3.01854933032316,1.06765302817952,2.07701771673448,1.62694529843943,0,0,0,0.459257792658427,1.82091168006717,0.917870904715969,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.82051789532479,1.16004861950546,0.154048617114644,0,0.413509717453592,0.429680979473094,0.725083469571143,0.93749290157711,5.2528901031575,0.165284915360978,0.576570202095319,0,0,0,4.7221852024596,0.6970372701606,0.308033580176089,0,0,0.37064843820784,1.71749864090389,0,0.316379424718726,0.571890581771475,0,0,0,0,0.179872457583315,1.37268514868027,0.824686816419805,0,0,0,0,0.731140468893853,0,0.682499557039929,14.5647594912324,1.13008116620243,0,1.32687795048244,0.876901770507525,0,0.655894752046633,0.608731130888112,0.92947049429925,0,0,0,0.7133421029625,0,0,0.658589785919804,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,5.90975216557434,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.455768223388005,0,0,0,0,0.457987967009312,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.732219924186332,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0,0.201550417460179,3.60299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0.320362237703084,0.157204305099666,1.24271716604159,0,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,1.63599316893057,3.32883516901568,0.189403005275089,1.0062716070103,0,0.228840068396924,0,0.466311601748341,0.295710299979268,0.159296767163702,0.449803112163605,0.931577741257556,1.65882483136342,5.58267600571789,4.17396049449387,2.25386413495828,18.659455396271,1.22061219961398,0.363697318405119,1.61115835563733,0,6.36953421917786,0.400027764663154,8.92828833475262,6.06149079778654,0,0.192619830407303,0,0,8.38811924395408,0,1.22368352253234,0.71635536432595,0,1.75427239662966,0,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,1.96565909307848,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.72407831176153,0,0,8.46422264857641,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0,0,0,0,0,1.63771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.342976018874837,0,0,0,0,0,0,0,3.65263488203798,0,0,0,0,4.64965701472501,0,0.801711364730253,0.207216164163037,0.51215543128185,0,0,0,0,0,0,0,0,0,0,0,0,0,9.27851545070559,9.71421986118279,0,0,0,0,0,0,0.231522474323834,0.655678681511872,0,0,0,0,0,0.4226557275834,9.51591842251775,0,0,0,0,0,0,0,0,0,0,0,0,1.5870805215462,15.2517957448368,1.84870251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| 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| ||
|short_description=p@chr13:38153005..38153062,- | |||
}} | }} |
Latest revision as of 15:53, 24 July 2015
Short description: | p@chr13:38153005..38153062, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:38153005..38153062, - |
Coexpression cluster: | C349_Mesothelial_Fibroblast_Preadipocyte_Ewing_mesenchymal_Skeletal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 2.51e-18 | 12 |
fibroblast | 8.17e-18 | 76 |
cardiac fibroblast | 6.37e-11 | 6 |
fibroblast of tunica adventitia of artery | 9.02e-09 | 4 |
fibroblast of the aortic adventitia | 9.02e-09 | 4 |
preadipocyte of the breast | 2.32e-07 | 3 |
fibrocyte | 2.69e-07 | 3 |
tendon cell | 2.69e-07 | 3 |
multi fate stem cell | 2.83e-07 | 427 |
omentum preadipocyte | 2.98e-07 | 3 |
somatic stem cell | 6.10e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
artery wall | 9.02e-09 | 4 |
tunica adventitia of artery | 9.02e-09 | 4 |
adventitia | 9.02e-09 | 4 |
tunica adventitia of blood vessel | 9.02e-09 | 4 |
aorta tunica adventitia | 9.02e-09 | 4 |
aorta wall | 9.02e-09 | 4 |
omentum | 4.00e-08 | 6 |
peritoneum | 4.00e-08 | 6 |
abdominal cavity | 4.00e-08 | 6 |
visceral peritoneum | 4.00e-08 | 6 |
heart | 2.31e-07 | 24 |
primitive heart tube | 2.31e-07 | 24 |
primary heart field | 2.31e-07 | 24 |
anterior lateral plate mesoderm | 2.31e-07 | 24 |
heart tube | 2.31e-07 | 24 |
heart primordium | 2.31e-07 | 24 |
cardiac mesoderm | 2.31e-07 | 24 |
cardiogenic plate | 2.31e-07 | 24 |
heart rudiment | 2.31e-07 | 24 |
dense regular connective tissue | 2.69e-07 | 3 |
tendon | 2.69e-07 | 3 |
regular connective tissue | 2.69e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.05e-08 | 14 |