FFCP PHASE1:Hg19::chr13:43938433..43938456,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:43938433..43938456,- | |||
|coexpression_cluster_id=C1326 | |coexpression_cluster_id=C1326 | ||
|description=CAGE_peak_at_chr13:43938433..43938456,- | |description=CAGE_peak_at_chr13:43938433..43938456,- | ||
|id=chr13:43938433..43938456,- | |id=chr13:43938433..43938456,- | ||
|ontology_enrichment_celltype=CL:0000359!1.02e-14!32;CL:0000192!1.59e-12!42;CL:0000514!1.59e-12!42;CL:0002592!3.36e-12!3;CL:1000413!1.28e-10!9;CL:0000222!6.75e-10!119;CL:0000680!7.12e-10!57;CL:0000056!7.12e-10!57;CL:0000355!7.12e-10!57;CL:0000569!1.07e-09!4;CL:0000011!1.07e-09!4;CL:1000306!3.50e-09!4;CL:0002547!3.50e-09!4;CL:0000187!4.25e-09!54;CL:0002589!1.55e-08!2;CL:0002583!1.94e-08!2;CL:0002494!2.86e-08!16;CL:0000183!4.33e-08!59;CL:0000393!6.57e-08!60;CL:0000211!6.57e-08!60;CL:0000071!3.90e-07!18;CL:0002546!3.90e-07!18;CL:0002139!8.17e-07!24 | |ontology_enrichment_celltype=CL:0000359!1.02e-14!32;CL:0000192!1.59e-12!42;CL:0000514!1.59e-12!42;CL:0002592!3.36e-12!3;CL:1000413!1.28e-10!9;CL:0000222!6.75e-10!119;CL:0000680!7.12e-10!57;CL:0000056!7.12e-10!57;CL:0000355!7.12e-10!57;CL:0000569!1.07e-09!4;CL:0000011!1.07e-09!4;CL:1000306!3.50e-09!4;CL:0002547!3.50e-09!4;CL:0000187!4.25e-09!54;CL:0002589!1.55e-08!2;CL:0002583!1.94e-08!2;CL:0002494!2.86e-08!16;CL:0000183!4.33e-08!59;CL:0000393!6.57e-08!60;CL:0000211!6.57e-08!60;CL:0000071!3.90e-07!18;CL:0002546!3.90e-07!18;CL:0002139!8.17e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.17e-17;2!CL:0002592;2.19e-12;3!CL:0002582;2.59e-12;3!CL:0000569;1.12e-09;4!CL:1000306;1.27e-09;4!CL:0002547;1.27e-09;4!CL:0002494;2.50e-09;16!CL:0002544;9.23e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002592,2.31e-12,3;CL:0002582,2.59e-12,3;CL:0000569,1.12e-09,4;CL:0000011,1.12e-09,4;CL:1000306,1.22e-09,4;CL:0002547,1.22e-09,4;CL:0002494,2.55e-09,16;CL:0002544,8.97e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000011;1.12e-09;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003498;2.19e-12;3!UBERON:0005985;2.19e-12;3!UBERON:0001621;2.19e-12;3!UBERON:0004797;1.27e-09;4!UBERON:0000415;1.27e-09;4!UBERON:0007240;1.27e-09;4!UBERON:0005742;1.27e-09;4!UBERON:0005734;1.27e-09;4!UBERON:0004664;1.27e-09;4!UBERON:0004663;1.27e-09;4!UBERON:0004573;2.76e-09;33!UBERON:0004571;2.76e-09;33!UBERON:0001637;3.19e-08;42!UBERON:0003509;3.19e-08;42!UBERON:0004572;3.19e-08;42!UBERON:0000947;2.86e-07;21!UBERON:0010191;2.86e-07;21!UBERON:0000948;4.86e-07;22!UBERON:0007500;9.77e-07;56!UBERON:0001981;9.77e-07;56!UBERON:0004537;9.77e-07;56 | |||
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|short_description=p@chr13:43938433..43938456,- | |short_description=p@chr13:43938433..43938456,- | ||
}} | }} |
Latest revision as of 16:08, 24 July 2015
Short description: | p@chr13:43938433..43938456, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:43938433..43938456, - |
Coexpression cluster: | C1326_mesenchymal_CD14_Fibroblast_Smooth_Preadipocyte_Endothelial_Renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 2.31e-12 | 3 |
visceral preadipocyte | 2.59e-12 | 3 |
cardiac mesenchymal cell | 1.12e-09 | 4 |
migratory trunk neural crest cell | 1.12e-09 | 4 |
fibroblast of tunica adventitia of artery | 1.22e-09 | 4 |
fibroblast of the aortic adventitia | 1.22e-09 | 4 |
cardiocyte | 2.55e-09 | 16 |
aortic endothelial cell | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
coronary artery | 2.31e-12 | 3 |
systemic artery | 9.04e-10 | 33 |
systemic arterial system | 9.04e-10 | 33 |
artery wall | 1.22e-09 | 4 |
tunica adventitia of artery | 1.22e-09 | 4 |
adventitia | 1.22e-09 | 4 |
tunica adventitia of blood vessel | 1.22e-09 | 4 |
aorta tunica adventitia | 1.22e-09 | 4 |
aorta wall | 1.22e-09 | 4 |
heart blood vessel | 6.13e-08 | 5 |
coronary vessel | 6.13e-08 | 5 |
artery | 7.94e-08 | 42 |
arterial blood vessel | 7.94e-08 | 42 |
arterial system | 7.94e-08 | 42 |
aorta | 2.77e-07 | 21 |
aortic system | 2.77e-07 | 21 |
splanchnic layer of lateral plate mesoderm | 6.23e-07 | 83 |