FFCP PHASE1:Hg19::chr13:46559452..46559474,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:46559452..46559474,- | |||
|coexpression_cluster_id=C1383 | |||
|description=CAGE_peak_at_chr13:46559452..46559474,- | |description=CAGE_peak_at_chr13:46559452..46559474,- | ||
|id=chr13:46559452..46559474,- | |id=chr13:46559452..46559474,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.59e-11!235;DOID:14566!7.86e-11!239 | |ontology_enrichment_disease=DOID:162!1.59e-11!235;DOID:14566!7.86e-11!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!3.27e-09!41;UBERON:0001890!3.27e-09!41;UBERON:0006240!3.27e-09!41;UBERON:0001049!8.56e-09!57;UBERON:0005068!8.56e-09!57;UBERON:0006241!8.56e-09!57;UBERON:0007135!8.56e-09!57;UBERON:0003080!1.46e-08!42;UBERON:0000955!2.24e-08!69;UBERON:0006238!2.24e-08!69;UBERON:0000073!2.32e-08!94;UBERON:0001016!2.32e-08!94;UBERON:0005743!3.71e-08!86;UBERON:0001017!6.57e-08!82;UBERON:0002020!6.66e-08!34;UBERON:0003528!6.66e-08!34;UBERON:0002616!9.68e-08!59;UBERON:0002791!1.12e-07!33;UBERON:0001893!1.24e-07!34;UBERON:0001869!6.32e-07!32;UBERON:0002346!6.98e-07!90 | |ontology_enrichment_uberon=UBERON:0002780!3.27e-09!41;UBERON:0001890!3.27e-09!41;UBERON:0006240!3.27e-09!41;UBERON:0001049!8.56e-09!57;UBERON:0005068!8.56e-09!57;UBERON:0006241!8.56e-09!57;UBERON:0007135!8.56e-09!57;UBERON:0003080!1.46e-08!42;UBERON:0000955!2.24e-08!69;UBERON:0006238!2.24e-08!69;UBERON:0000073!2.32e-08!94;UBERON:0001016!2.32e-08!94;UBERON:0005743!3.71e-08!86;UBERON:0001017!6.57e-08!82;UBERON:0002020!6.66e-08!34;UBERON:0003528!6.66e-08!34;UBERON:0002616!9.68e-08!59;UBERON:0002791!1.12e-07!33;UBERON:0001893!1.24e-07!34;UBERON:0001869!6.32e-07!32;UBERON:0002346!6.98e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.59e-08;34!UBERON:0002020;1.59e-08;34!UBERON:0001893;1.87e-08;34!UBERON:0002791;2.21e-08;32!UBERON:0002780;6.90e-08;41!UBERON:0001890;6.90e-08;41!UBERON:0000073;1.50e-07;53!UBERON:0002616;1.50e-07;53!UBERON:0001869;1.74e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.04e-12,56;UBERON:0005068,1.04e-12,56;UBERON:0006241,1.04e-12,56;UBERON:0007135,1.04e-12,56;UBERON:0000073,3.60e-12,53;UBERON:0002616,3.60e-12,53;UBERON:0002780,1.16e-11,41;UBERON:0001890,1.16e-11,41;UBERON:0003080,1.16e-11,41;UBERON:0006240,1.16e-11,41;UBERON:0002346,1.06e-10,86;UBERON:0000955,1.54e-10,68;UBERON:0006238,1.54e-10,68;UBERON:0001017,5.35e-10,81;UBERON:0003528,1.35e-09,34;UBERON:0002020,1.35e-09,34;UBERON:0002791,2.04e-09,32;UBERON:0001893,2.30e-09,34;UBERON:0003075,2.85e-09,82;UBERON:0007284,2.85e-09,82;UBERON:0001016,2.90e-09,89;UBERON:0001869,2.53e-08,32;UBERON:0010371,2.69e-08,104;UBERON:0004121,8.93e-08,171;UBERON:0000924,8.93e-08,171;UBERON:0006601,8.93e-08,171;UBERON:0003056,1.39e-07,61 | |||
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| ||
|short_description=p@chr13:46559452..46559474,- | |short_description=p@chr13:46559452..46559474,- | ||
}} | }} |
Latest revision as of 16:19, 24 July 2015
Short description: | p@chr13:46559452..46559474, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:46559452..46559474, - |
Coexpression cluster: | C1383_neuroectodermal_neuroblastoma_Hepatocyte_testicular_amygdala_Monocytederived_olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.04e-12 | 56 |
neural rod | 1.04e-12 | 56 |
future spinal cord | 1.04e-12 | 56 |
neural keel | 1.04e-12 | 56 |
regional part of nervous system | 3.60e-12 | 53 |
regional part of brain | 3.60e-12 | 53 |
regional part of forebrain | 1.16e-11 | 41 |
forebrain | 1.16e-11 | 41 |
anterior neural tube | 1.16e-11 | 41 |
future forebrain | 1.16e-11 | 41 |
neurectoderm | 1.06e-10 | 86 |
brain | 1.54e-10 | 68 |
future brain | 1.54e-10 | 68 |
central nervous system | 5.35e-10 | 81 |
brain grey matter | 1.35e-09 | 34 |
gray matter | 1.35e-09 | 34 |
regional part of telencephalon | 2.04e-09 | 32 |
telencephalon | 2.30e-09 | 34 |
neural plate | 2.85e-09 | 82 |
presumptive neural plate | 2.85e-09 | 82 |
nervous system | 2.90e-09 | 89 |
cerebral hemisphere | 2.53e-08 | 32 |
ecto-epithelium | 2.69e-08 | 104 |
ectoderm-derived structure | 8.93e-08 | 171 |
ectoderm | 8.93e-08 | 171 |
presumptive ectoderm | 8.93e-08 | 171 |
pre-chordal neural plate | 1.39e-07 | 61 |