FFCP PHASE1:Hg19::chr13:74071854..74071871,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:74071854..74071871,+ | |||
|coexpression_cluster_id=C186 | |||
|description=CAGE_peak_at_chr13:74071854..74071871,+ | |description=CAGE_peak_at_chr13:74071854..74071871,+ | ||
|id=chr13:74071854..74071871,+ | |id=chr13:74071854..74071871,+ | ||
|ontology_enrichment_celltype=CL:0002076!2.43e-26!43;CL:0002159!2.45e-23!13;CL:0002368!3.85e-23!13;CL:0000066!2.85e-20!254;CL:0000223!3.09e-18!59;CL:0000076!2.21e-13!62;CL:0000244!1.94e-12!4;CL:0000731!1.94e-12!4;CL:0000575!3.88e-11!2;CL:0002251!4.42e-11!21;CL:0002077!8.56e-11!33;CL:0000362!2.13e-10!8;CL:0000312!9.11e-10!5;CL:0002202!4.03e-09!9;CL:0002632!4.03e-09!9;CL:0000240!3.27e-08!6;CL:0000311!3.27e-08!6;CL:0000079!3.27e-08!6;CL:0000237!3.27e-08!6;CL:0000036!3.27e-08!6;CL:0000357!3.27e-08!6;CL:0000114!3.27e-08!6;CL:0000068!8.63e-08!3;CL:0000069!8.63e-08!3;CL:0000307!8.63e-08!3;CL:0000377!8.63e-08!3;CL:0002328!1.69e-07!3;CL:0002621!2.35e-07!3;CL:0002166!3.35e-07!3;CL:0000220!3.68e-07!246;CL:0002321!4.62e-07!248 | |ontology_enrichment_celltype=CL:0002076!2.43e-26!43;CL:0002159!2.45e-23!13;CL:0002368!3.85e-23!13;CL:0000066!2.85e-20!254;CL:0000223!3.09e-18!59;CL:0000076!2.21e-13!62;CL:0000244!1.94e-12!4;CL:0000731!1.94e-12!4;CL:0000575!3.88e-11!2;CL:0002251!4.42e-11!21;CL:0002077!8.56e-11!33;CL:0000362!2.13e-10!8;CL:0000312!9.11e-10!5;CL:0002202!4.03e-09!9;CL:0002632!4.03e-09!9;CL:0000240!3.27e-08!6;CL:0000311!3.27e-08!6;CL:0000079!3.27e-08!6;CL:0000237!3.27e-08!6;CL:0000036!3.27e-08!6;CL:0000357!3.27e-08!6;CL:0000114!3.27e-08!6;CL:0000068!8.63e-08!3;CL:0000069!8.63e-08!3;CL:0000307!8.63e-08!3;CL:0000377!8.63e-08!3;CL:0002328!1.69e-07!3;CL:0002621!2.35e-07!3;CL:0002166!3.35e-07!3;CL:0000220!3.68e-07!246;CL:0002321!4.62e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000244;6.18e-19;4!CL:0000731;6.18e-19;4!CL:0002623;2.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,6.18e-19,4;CL:0000731,6.18e-19,4;CL:0000076,3.41e-10,63;CL:0002623,2.63e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!4.53e-23!14;DOID:3151!7.90e-07!1;DOID:3149!7.90e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.39e-32;14!DOID:3151;1.08e-19;1!DOID:3149;1.08e-19;1!DOID:3451;1.57e-10;2!DOID:4159;1.57e-10;2!DOID:0060122;1.57e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.47e-32,14;DOID:3151,1.08e-19,1;DOID:3149,1.08e-19,1;DOID:3451,1.57e-10,2;DOID:4159,1.57e-10,2;DOID:0060122,1.57e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0000365!8.61e-17!5;UBERON:0005910!5.13e-14!6;UBERON:0003343!2.18e-12!4;UBERON:0004785!2.18e-12!4;UBERON:0001004!1.27e-10!72;UBERON:0003729!5.29e-10!5;UBERON:0003102!8.20e-09!95;UBERON:0000166!3.27e-08!21;UBERON:0000161!4.29e-08!35;UBERON:0004815!1.69e-07!3;UBERON:0002031!1.69e-07!3;UBERON:0004119!2.00e-07!169;UBERON:0000925!2.00e-07!169;UBERON:0006595!2.00e-07!169;UBERON:0001949!2.35e-07!3;UBERON:0000344!5.06e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;4.28e-19;1!UBERON:0005056;4.28e-19;1!UBERON:0004176;4.28e-19;1!UBERON:0000365;2.34e-15;5!UBERON:0005910;5.76e-13;6!UBERON:0000486;6.16e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,5.62e-19,1;UBERON:0005056,5.62e-19,1;UBERON:0000365,2.34e-15,5;UBERON:0005910,5.76e-13,6 | |||
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|short_description=p@chr13:74071854..74071871,+ | |short_description=p@chr13:74071854..74071871,+ | ||
}} | }} |
Latest revision as of 17:02, 24 July 2015
Short description: | p@chr13:74071854..74071871, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:74071854..74071871, + |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 6.18e-19 | 4 |
urothelial cell | 6.18e-19 | 4 |
squamous epithelial cell | 3.41e-10 | 63 |
acinar cell of salivary gland | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 5.62e-19 | 1 |
external female genitalia | 5.62e-19 | 1 |
urothelium | 2.34e-15 | 5 |
transitional epithelium | 5.76e-13 | 6 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.47e-32 | 14 |
skin squamous cell carcinoma | 1.08e-19 | 1 |
keratoacanthoma | 1.08e-19 | 1 |
skin carcinoma | 1.57e-10 | 2 |
skin cancer | 1.57e-10 | 2 |
integumentary system cancer | 1.57e-10 | 2 |